RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CLEC10AQ8IUN9 316 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 KCTD17Q8N5Z5 321 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 TRIM58Q8NG06 486 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 HPS3Q969F9 1004 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 ANO3Q9BYT9 981 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 MMRN2Q9H8L6 949 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
CD44-210ENST00000434472 TRIM10Q9UDY6 481 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 PCDHA1Q9Y5I3 950 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 COL4A3BPQ9Y5P4 624 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 ANKRD31Q8N7Z5 1873 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 PITPNM2Q9BZ72 1349 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 TARSL2A2RTX5 802 aaKnown RBP11.55□□□□□ -0.56
CD44-210ENST00000434472 TRIM37O94972 964 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 RHOXF2BP0C7M4 288 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 PLA2G4BP0C869 781 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 USP14P54578 494 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 MARSP56192 900 aaKnown RBP11.55□□□□□ -0.56
CD44-210ENST00000434472 CDC37Q16543 378 aaPredicted RBP11.55□□□□□ -0.56
CD44-210ENST00000434472 CCDC70Q6NSX1 233 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 PDXDC1Q6P996 788 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 TMEM179Q6ZVK1 233 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 KCNK18Q7Z418 384 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 ERMNQ8TAM6 284 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 SYN2Q92777 582 aaPredicted RBP11.55□□□□□ -0.56
CD44-210ENST00000434472 PKNOX2Q96KN3 472 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 PNKPQ96T60 521 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 RHOXF2Q9BQY4 288 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 DEF6Q9H4E7 631 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 KCNMB3Q9NPA1 279 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 LUC7LQ9NQ29 371 aaKnown RBP11.55□□□□□ -0.56
CD44-210ENST00000434472 FAM184BQ9ULE4 1060 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 L1RE1Q9UN81 338 aa11.55□□□□□ -0.56
CD44-210ENST00000434472 SSU72P8A0A1W2PR75 194 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 TRAF5O00463 557 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 ATP1A1P05023 1023 aaKnown RBP11.54□□□□□ -0.56
CD44-210ENST00000434472 EEF2P13639 858 aaKnown RBP11.54□□□□□ -0.56
CD44-210ENST00000434472 PRLRP16471 622 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 KIF11P52732 1056 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
CD44-210ENST00000434472 Q4G0T1 1027 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 ZCWPW2Q504Y3 356 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 NCAPH2Q6IBW4 605 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 TATDN1Q6P1N9 297 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 CACNA2D4Q7Z3S7 1137 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 GMCL1P1Q8NEA9 526 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 RUBCNQ92622 972 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 GMCL1Q96IK5 515 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 ALS2CR12Q96Q35 445 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 MXD3Q9BW11 206 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 AMNQ9BXJ7 453 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 TANGO6Q9C0B7 1094 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 ABCB6Q9NP58 842 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 ST7Q9NRC1 585 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 CEP72Q9P209 647 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 JRKLQ9Y4A0 524 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 PCDHA13Q9Y5I0 950 aa11.54□□□□□ -0.56
CD44-210ENST00000434472 PJA2O43164 708 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 AKR1B10O60218 316 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
CD44-210ENST00000434472 CYP2C19P33261 490 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 EIF4A3P38919 411 aaKnown RBP11.53□□□□□ -0.56
CD44-210ENST00000434472 MMP14P50281 582 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 ITIH3Q06033 890 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 NFIAQ12857 509 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 LRRC41Q15345 812 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 STYK1Q6J9G0 422 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 RRAGAQ7L523 313 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 GPBP1Q86WP2 473 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 FBXO11Q86XK2 927 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 C2CD5Q86YS7 1000 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 ZC3H3Q8IXZ2 948 aaKnown RBP11.53□□□□□ -0.56
CD44-210ENST00000434472 CCDC155Q8N6L0 562 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 CAGE1Q8TC20 777 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 FAM20AQ96MK3 541 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 IFIH1Q9BYX4 1025 aaKnown RBP11.53□□□□□ -0.56
CD44-210ENST00000434472 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 FAM207AQ9NSI2 230 aaPredicted RBP11.53□□□□□ -0.56
CD44-210ENST00000434472 SERPINA10Q9UK55 444 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
CD44-210ENST00000434472 KIAA1024Q9UPX6 916 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 MYH4Q9Y623 1939 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 POLR3GO15318 223 aaPredicted RBP11.53□□□□□ -0.56
CD44-210ENST00000434472 ENTPD3O75355 529 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 KRT18P05783 430 aaKnown RBP11.53□□□□□ -0.56
CD44-210ENST00000434472 VSNL1P62760 191 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 ICA1Q05084 483 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 ECM1Q16610 540 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 EDRF1Q3B7T1 1238 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 COL23A1Q86Y22 540 aaPredicted RBP11.53□□□□□ -0.56
CD44-210ENST00000434472 BAP1Q92560 729 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 LACRTQ9GZZ8 138 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 VIPAS39Q9H9C1 493 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 PSD3Q9NYI0 1048 aa11.53□□□□□ -0.56
CD44-210ENST00000434472 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms