RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 RAB30Q15771 203 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 VSIG10LQ86VR7 867 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 RPUSD2Q8IZ73 545 aaKnown RBP26.25■■□□□ 1.79
HOMER3-203ENST00000433218 PPTC7Q8NI37 304 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 MTIF3Q9H2K0 278 aaKnown RBP26.25■■□□□ 1.79
HOMER3-203ENST00000433218 GTF2IRD1Q9UHL9 959 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 MSRAQ9UJ68 235 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 NOD1Q9Y239 953 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 TCF20Q9UGU0 1960 aaKnown RBP26.25■■□□□ 1.79
HOMER3-203ENST00000433218 SH2B2O14492 632 aaPredicted RBP26.24■■□□□ 1.79
HOMER3-203ENST00000433218 SLC27A2O14975 620 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 ATP2A2P16615 1042 aaKnown RBP26.24■■□□□ 1.79
HOMER3-203ENST00000433218 MRPS9P82933 396 aaKnown RBP26.24■■□□□ 1.79
HOMER3-203ENST00000433218 SEMA3FQ13275 785 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 MFSD10Q14728 455 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 SART3Q15020 963 aaKnown RBP26.24■■□□□ 1.79
HOMER3-203ENST00000433218 DGKDQ16760 1214 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 MYSM1Q5VVJ2 828 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 TMCO2Q7Z6W1 182 aaPredicted RBP26.24■■□□□ 1.79
HOMER3-203ENST00000433218 CATIPQ7Z7H3 387 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 SESTD1Q86VW0 696 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 PPM1EQ8WY54 764 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 LOXHD1Q8IVV2 1947 aa26.24■■□□□ 1.79
HOMER3-203ENST00000433218 GCOM1H8Y6P7 765 aaPredicted RBP26.23■■□□□ 1.79
HOMER3-203ENST00000433218 HAS3O00219 553 aa26.23■■□□□ 1.79
HOMER3-203ENST00000433218 POLR2MP0CAP2 368 aa26.23■■□□□ 1.79
HOMER3-203ENST00000433218 HOXD8P13378 290 aaPredicted RBP26.23■■□□□ 1.79
HOMER3-203ENST00000433218 KIAA0753Q2KHM9 967 aa26.23■■□□□ 1.79
HOMER3-203ENST00000433218 DHX37Q8IY37 1157 aaKnown RBP26.23■■□□□ 1.79
HOMER3-203ENST00000433218 hCG_1642624A0A1W2PR95 340 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 CASTP20810 708 aaKnown RBP26.22■■□□□ 1.79
HOMER3-203ENST00000433218 CELF3Q5SZQ8 465 aaKnown RBP26.22■■□□□ 1.79
HOMER3-203ENST00000433218 PPP2R2DQ66LE6 453 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 BRWD1Q9NSI6 2320 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 EPOPA6NHQ4 379 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 CA3P07451 260 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 CCND2P30279 289 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 CREB3L3Q68CJ9 461 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 TRAF7Q6Q0C0 670 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 USP17L6PQ6QN14 398 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 SRBD1Q8N5C6 995 aaKnown RBP26.22■■□□□ 1.79
HOMER3-203ENST00000433218 SPATA33Q96N06 139 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 SPZ1Q9BXG8 430 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 SLC28A3Q9HAS3 691 aa26.22■■□□□ 1.79
HOMER3-203ENST00000433218 ATG2AQ2TAZ0 1938 aa26.21■■□□□ 1.79
HOMER3-203ENST00000433218 NLRC5Q86WI3 1866 aa26.21■■□□□ 1.79
HOMER3-203ENST00000433218 DDAH1O94760 285 aa26.21■■□□□ 1.79
HOMER3-203ENST00000433218 PFKMP08237 780 aa26.21■■□□□ 1.79
HOMER3-203ENST00000433218 BFSP2Q13515 415 aa26.21■■□□□ 1.79
HOMER3-203ENST00000433218 LAMC2Q13753 1193 aa26.21■■□□□ 1.79
HOMER3-203ENST00000433218 TRIM71Q2Q1W2 868 aaKnown RBP26.21■■□□□ 1.79
HOMER3-203ENST00000433218 GAS2L1Q99501 681 aaPredicted RBP26.21■■□□□ 1.79
HOMER3-203ENST00000433218 FTOQ9C0B1 505 aaKnown RBP eCLIP26.21■■□□□ 1.79
HOMER3-203ENST00000433218 CERS4Q9HA82 394 aa26.21■■□□□ 1.79
HOMER3-203ENST00000433218 RFXAPO00287 272 aa26.2■■□□□ 1.78
HOMER3-203ENST00000433218 NBNO60934 754 aa26.2■■□□□ 1.78
HOMER3-203ENST00000433218 MBTPS1Q14703 1052 aa26.2■■□□□ 1.78
HOMER3-203ENST00000433218 CCDC85BQ15834 202 aaPredicted RBP26.2■■□□□ 1.78
HOMER3-203ENST00000433218 LRRC8DQ7L1W4 858 aa26.2■■□□□ 1.78
HOMER3-203ENST00000433218 C16orf70Q9BSU1 422 aa26.2■■□□□ 1.78
HOMER3-203ENST00000433218 ANO2Q9NQ90 1003 aa26.2■■□□□ 1.78
HOMER3-203ENST00000433218 MAP3K20Q9NYL2 800 aaKnown RBP26.2■■□□□ 1.78
HOMER3-203ENST00000433218 PCDHA11Q9Y5I1 949 aa26.2■■□□□ 1.78
HOMER3-203ENST00000433218 NCOR1O75376 2440 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 CKBP12277 381 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 RFC2P35250 354 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 NECTIN1Q15223 517 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 CASC1Q6TDU7 716 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 TRIM50Q86XT4 487 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 C7orf31Q8N865 590 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 RETREG2Q8NC44 543 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 TCEANC2Q96MN5 208 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 RTEL1Q9NZ71 1219 aa26.19■■□□□ 1.78
HOMER3-203ENST00000433218 MEIS2O14770 477 aa26.18■■□□□ 1.78
HOMER3-203ENST00000433218 IGFBP4P22692 258 aa26.18■■□□□ 1.78
HOMER3-203ENST00000433218 DEFB103AP81534 67 aa26.18■■□□□ 1.78
HOMER3-203ENST00000433218 CTCFLQ8NI51 663 aaPredicted RBP26.18■■□□□ 1.78
HOMER3-203ENST00000433218 CAGE1Q8TC20 777 aa26.18■■□□□ 1.78
HOMER3-203ENST00000433218 AFAP1L1Q8TED9 768 aa26.18■■□□□ 1.78
HOMER3-203ENST00000433218 SELPP16109 830 aa26.17■■□□□ 1.78
HOMER3-203ENST00000433218 RBL2Q08999 1139 aa26.17■■□□□ 1.78
HOMER3-203ENST00000433218 NFXL1Q6ZNB6 911 aa26.17■■□□□ 1.78
HOMER3-203ENST00000433218 INPP4AQ96PE3 977 aaPredicted RBP26.17■■□□□ 1.78
HOMER3-203ENST00000433218 BDP1A6H8Y1 2624 aa26.17■■□□□ 1.78
HOMER3-203ENST00000433218 LCHNA4D1U4 455 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 CDC45O75419 566 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 LGALS2P05162 132 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 MCM5P33992 734 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 WDR5P61964 334 aaKnown RBP26.16■■□□□ 1.78
HOMER3-203ENST00000433218 UBE2SQ16763 222 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 ZNF618Q5T7W0 954 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 KRT40Q6A162 431 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 SAMD3Q8N6K7 520 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 RRP36Q96EU6 259 aaKnown RBP26.16■■□□□ 1.78
HOMER3-203ENST00000433218 KATNAL1Q9BW62 490 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 OSBPL7Q9BZF2 842 aa26.16■■□□□ 1.78
HOMER3-203ENST00000433218 MICU3Q86XE3 530 aa26.15■■□□□ 1.78
HOMER3-203ENST00000433218 HERC6Q8IVU3 1022 aa26.15■■□□□ 1.78
HOMER3-203ENST00000433218 CCDC82Q8N4S0 544 aa26.15■■□□□ 1.78
HOMER3-203ENST00000433218 SLC9A7Q96T83 725 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms