RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 LCMT1Q9UIC8 334 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 FLT1P17948 1338 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 CLRN2A0PK11 232 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 SEPT9Q9UHD8 586 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-208ENST00000430669 CCNE1P24864 410 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 DAAM2Q86T65 1068 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 SLC7A3Q8WY07 619 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 SERPINA10Q9UK55 444 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 SLC10A5Q5PT55 438 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 VPS18Q9P253 973 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 GDF11O95390 407 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 MFAP3P55082 362 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 AFAP1L1Q8TED9 768 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 CARD6Q9BX69 1037 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 HARSP12081 509 aaKnown RBP12.63□□□□□ -0.39
PTCH1-208ENST00000430669 SCARF1Q14162 830 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 C6orf163Q5TEZ5 329 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 DPH6Q7L8W6 267 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 TEX2Q8IWB9 1127 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 RASGRP4Q8TDF6 673 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 ZNF341Q9BYN7 854 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 ZNF215Q9UL58 517 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-208ENST00000430669 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 MYH4Q9Y623 1939 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 SERPING1P05155 500 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 KCTD2Q14681 263 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 KMT5BQ4FZB7 885 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 UTP14CQ5TAP6 766 aaKnown RBP12.63□□□□□ -0.39
PTCH1-208ENST00000430669 METTL13Q8N6R0 699 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 HAUS1Q96CS2 278 aa12.63□□□□□ -0.39
PTCH1-208ENST00000430669 HDLBPQ00341 1268 aaKnown RBP12.62□□□□□ -0.39
PTCH1-208ENST00000430669 RNF187Q5TA31 235 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-208ENST00000430669 COA7Q96BR5 231 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 HOXC10Q9NYD6 342 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 POLR2BP30876 1174 aaKnown RBP12.62□□□□□ -0.39
PTCH1-208ENST00000430669 TXNRD1Q16881 649 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 ZNF365Q70YC5 407 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 TYW1Q9NV66 732 aaKnown RBP12.62□□□□□ -0.39
PTCH1-208ENST00000430669 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 CAPN2P17655 700 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 ITPK1Q13572 414 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 PRR5LQ6MZQ0 368 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 RABGGTAQ92696 567 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 TBC1D22BQ9NU19 505 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 CDC27P30260 824 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 ALDH3A1P30838 453 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 ELF2Q15723 593 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 NCAPG2Q86XI2 1143 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 ADGRF4Q8IZF3 695 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 PGBD1Q96JS3 809 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 FTOQ9C0B1 505 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTCH1-208ENST00000430669 GCNT4Q9P109 453 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 ZBED6P86452 979 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 KCNB1Q14721 858 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 EAPPQ56P03 285 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-208ENST00000430669 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 NAV1Q8NEY1 1877 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 GH2P01242 217 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 FAM182BQ5T319 152 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 DENND2CQ68D51 928 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 TIPINQ9BVW5 301 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 SFNP31947 248 aa12.62□□□□□ -0.39
PTCH1-208ENST00000430669 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTCH1-208ENST00000430669 DUOX1Q9NRD9 1551 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 GOLGA6CA6NDK9 693 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 GOLGA6DP0CG33 693 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
PTCH1-208ENST00000430669 STOX1Q6ZVD7 989 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 FAM186BQ8IYM0 893 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 GOLGA6AQ9NYA3 693 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 DAAM1Q9Y4D1 1078 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 PDIA5Q14554 519 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 CACTINQ8WUQ7 758 aaKnown RBP12.61□□□□□ -0.39
PTCH1-208ENST00000430669 NLRC4Q9NPP4 1024 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTCH1-208ENST00000430669 EBAG9O00559 213 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 POLR2FP61218 127 aaKnown RBP12.61□□□□□ -0.39
PTCH1-208ENST00000430669 GABPB1Q06547 395 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-208ENST00000430669 LPAR1Q92633 364 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 CEP63Q96MT8 703 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 TRPM3Q9HCF6 1732 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-208ENST00000430669 PABPN1LA6NDY0 278 aaKnown RBP12.61□□□□□ -0.39
PTCH1-208ENST00000430669 XPOTO43592 962 aaKnown RBP12.61□□□□□ -0.39
PTCH1-208ENST00000430669 CASP14P31944 242 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 SLC16A2P36021 539 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 RBL2Q08999 1139 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 SLFN12LQ6IEE8 588 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 RFX1P22670 979 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 EPSTI1Q96J88 318 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 KMT5AQ9NQR1 393 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 GJC1P36383 396 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 LMNB2Q03252 620 aa12.61□□□□□ -0.39
PTCH1-208ENST00000430669 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms