RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 GTF2IRD1Q9UHL9 959 aa19.8■□□□□ 0.76
CPSF4-203ENST00000430038 SLC4A7Q9Y6M7 1214 aa19.8■□□□□ 0.76
CPSF4-203ENST00000430038 hCG_1642624A0A1W2PR95 340 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 ZBBXA8MT70 800 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 PITPNM1O00562 1244 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 GGPS1O95749 300 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 F2P00734 622 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 SART3Q15020 963 aaKnown RBP19.79■□□□□ 0.76
CPSF4-203ENST00000430038 TRAF7Q6Q0C0 670 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 SAMD3Q8N6K7 520 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 MAP3K14Q99558 947 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 C16orf70Q9BSU1 422 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 SPZ1Q9BXG8 430 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 TRANK1O15050 2925 aa19.79■□□□□ 0.76
CPSF4-203ENST00000430038 FRMPD4Q14CM0 1322 aa19.78■□□□□ 0.76
CPSF4-203ENST00000430038 MEIS2O14770 477 aa19.78■□□□□ 0.76
CPSF4-203ENST00000430038 MFSD10Q14728 455 aa19.78■□□□□ 0.76
CPSF4-203ENST00000430038 KIAA0753Q2KHM9 967 aa19.78■□□□□ 0.76
CPSF4-203ENST00000430038 TRIM71Q2Q1W2 868 aaKnown RBP19.78■□□□□ 0.76
CPSF4-203ENST00000430038 SPRED2Q7Z698 418 aa19.78■□□□□ 0.76
CPSF4-203ENST00000430038 RTEL1Q9NZ71 1219 aa19.78■□□□□ 0.76
CPSF4-203ENST00000430038 MSRAQ9UJ68 235 aa19.78■□□□□ 0.76
CPSF4-203ENST00000430038 ATP2A2P16615 1042 aaKnown RBP19.77■□□□□ 0.76
CPSF4-203ENST00000430038 CCND2P30279 289 aa19.77■□□□□ 0.76
CPSF4-203ENST00000430038 RAB30Q15771 203 aa19.77■□□□□ 0.76
CPSF4-203ENST00000430038 TMCO2Q7Z6W1 182 aaPredicted RBP19.77■□□□□ 0.76
CPSF4-203ENST00000430038 RETREG2Q8NC44 543 aa19.77■□□□□ 0.76
CPSF4-203ENST00000430038 SPATA33Q96N06 139 aa19.77■□□□□ 0.76
CPSF4-203ENST00000430038 PRRC2BQ5JSZ5 2229 aaKnown RBP19.77■□□□□ 0.76
CPSF4-203ENST00000430038 RFXAPO00287 272 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 NBNO60934 754 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 PPFIA4O75335 1185 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 DDAH1O94760 285 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 PFKMP08237 780 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 CKBP12277 381 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 MCM5P33992 734 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 MBTPS1Q14703 1052 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 PPM1EQ8WY54 764 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 INPP4AQ96PE3 977 aaPredicted RBP19.76■□□□□ 0.75
CPSF4-203ENST00000430038 OSBPL7Q9BZF2 842 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 MTIF3Q9H2K0 278 aaKnown RBP19.76■□□□□ 0.75
CPSF4-203ENST00000430038 NOD1Q9Y239 953 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 PCDHA11Q9Y5I1 949 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 TTC28Q96AY4 2481 aa19.76■□□□□ 0.75
CPSF4-203ENST00000430038 EPOPA6NHQ4 379 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 SPATA31C2B4DYI2 1134 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 TGFB3P10600 412 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 RFC2P35250 354 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 RBL2Q08999 1139 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 BFSP2Q13515 415 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 CASC1Q6TDU7 716 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 RASEFQ8IZ41 740 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 CCDC82Q8N4S0 544 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 C7orf31Q8N865 590 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 CTCFLQ8NI51 663 aaPredicted RBP19.75■□□□□ 0.75
CPSF4-203ENST00000430038 TCEANC2Q96MN5 208 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 MTA3Q9BTC8 594 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 FTOQ9C0B1 505 aaKnown RBP eCLIP19.75■□□□□ 0.75
CPSF4-203ENST00000430038 SLC28A3Q9HAS3 691 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 ANO2Q9NQ90 1003 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 MUC3AQ02505 3323 aa19.75■□□□□ 0.75
CPSF4-203ENST00000430038 CA3P07451 260 aa19.74■□□□□ 0.75
CPSF4-203ENST00000430038 SMARCA1P28370 1054 aa19.74■□□□□ 0.75
CPSF4-203ENST00000430038 ICAM3P32942 547 aa19.74■□□□□ 0.75
CPSF4-203ENST00000430038 LIFRP42702 1097 aa19.74■□□□□ 0.75
CPSF4-203ENST00000430038 ADCK5Q3MIX3 580 aa19.74■□□□□ 0.75
CPSF4-203ENST00000430038 BMP2KLQ5H9B9 411 aa19.74■□□□□ 0.75
CPSF4-203ENST00000430038 RRP36Q96EU6 259 aaKnown RBP19.74■□□□□ 0.75
CPSF4-203ENST00000430038 TMEM87BQ96K49 555 aa19.74■□□□□ 0.75
CPSF4-203ENST00000430038 SELPP16109 830 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 CCDC85BQ15834 202 aaPredicted RBP19.73■□□□□ 0.75
CPSF4-203ENST00000430038 ZNF618Q5T7W0 954 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 KCNV1Q6PIU1 500 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 NFXL1Q6ZNB6 911 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 LRRC8DQ7L1W4 858 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 CYFIP1Q7L576 1253 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 CAGE1Q8TC20 777 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 AFAP1L1Q8TED9 768 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 CERS4Q9HA82 394 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 MLXIPQ9HAP2 919 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 BRPF3Q9ULD4 1205 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 XIRP2A4UGR9 3374 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 KAT6AQ92794 2004 aa19.73■□□□□ 0.75
CPSF4-203ENST00000430038 CCDC69A6NI79 296 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 PIK3CDO00329 1044 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 ATP9AO75110 1047 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 CXCL10P02778 98 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 HOXC8P31273 242 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 KIF5BP33176 963 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 DEFB103AP81534 67 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 EXOSC10Q01780 885 aaKnown RBP19.72■□□□□ 0.75
CPSF4-203ENST00000430038 TRAF1Q13077 416 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 PPP2R2DQ66LE6 453 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 HERC6Q8IVU3 1022 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 TMTC2Q8N394 836 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 FANCBQ8NB91 859 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 GAS2L1Q99501 681 aaPredicted RBP19.72■□□□□ 0.75
CPSF4-203ENST00000430038 GPR20Q99678 358 aa19.72■□□□□ 0.75
CPSF4-203ENST00000430038 H3BRB1 525 aa19.71■□□□□ 0.75
CPSF4-203ENST00000430038 LGALS2P05162 132 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms