RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ZNF536O15090 1300 aa7.4□□□□□ -1.22
LINC00458-202ENST00000427299 PRDM2Q13029 1718 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 NCAPHQ15003 741 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 CDSNQ15517 529 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 E4F1Q66K89 784 aaPredicted RBP7.39□□□□□ -1.23
LINC00458-202ENST00000427299 GLB1LQ6UWU2 654 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 CEP68Q76N32 757 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 NT5DC4Q86YG4 428 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 CHST13Q8NET6 341 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 MBD6Q96DN6 1003 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 PPP4R1LQ9P1A2 415 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 TMEFF2Q9UIK5 374 aaPredicted RBP7.39□□□□□ -1.23
LINC00458-202ENST00000427299 ZNF652Q9Y2D9 606 aa7.39□□□□□ -1.23
LINC00458-202ENST00000427299 ABCC8Q09428 1581 aa7.38□□□□□ -1.23
LINC00458-202ENST00000427299 LAMTOR5O43504 91 aa7.38□□□□□ -1.23
LINC00458-202ENST00000427299 NKX3-2P78367 333 aa7.38□□□□□ -1.23
LINC00458-202ENST00000427299 SURF1Q15526 300 aa7.38□□□□□ -1.23
LINC00458-202ENST00000427299 BTN2A2Q8WVV5 523 aa7.38□□□□□ -1.23
LINC00458-202ENST00000427299 SRRDQ9UH36 339 aa7.38□□□□□ -1.23
LINC00458-202ENST00000427299 FBXL7Q9UJT9 491 aa7.38□□□□□ -1.23
LINC00458-202ENST00000427299 GOLGA3Q08378 1498 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 TBX1O43435 398 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 FSHBP01225 129 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 BCL6P41182 706 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 GTF2A2P52657 109 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 KCNAB2Q13303 367 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 TESK1Q15569 626 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 DIO2Q92813 273 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 TRMT2BQ96GJ1 504 aaKnown RBP7.37□□□□□ -1.23
LINC00458-202ENST00000427299 YTHDC1Q96MU7 727 aaKnown RBP7.37□□□□□ -1.23
LINC00458-202ENST00000427299 STRIP2Q9ULQ0 834 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 TSC22D4Q9Y3Q8 395 aa7.37□□□□□ -1.23
LINC00458-202ENST00000427299 SCG5P05408 212 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 ICAM4Q14773 271 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 PRAMEF18Q5VWM3 479 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 PKN3Q6P5Z2 889 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 PLEKHH3Q7Z736 793 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 KREMEN2Q8NCW0 462 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 PPP1R14AQ96A00 147 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 TMEM169Q96HH4 297 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 YIPF4Q9BSR8 244 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 CD248Q9HCU0 757 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 CCDC88BA6NC98 1476 aa7.36□□□□□ -1.23
LINC00458-202ENST00000427299 BICRAQ9NZM4 1560 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 MYO1BO43795 1136 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 C6P13671 934 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 IL13P35225 146 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 ACBD5Q5T8D3 534 aaPredicted RBP7.35□□□□□ -1.23
LINC00458-202ENST00000427299 SPRED1Q7Z699 444 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 Q8N1X5 172 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 ARRDC4Q8NCT1 418 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 SH3RF3Q8TEJ3 882 aaPredicted RBP7.35□□□□□ -1.23
LINC00458-202ENST00000427299 SORCS2Q96PQ0 1159 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 SCAND2PQ9GZW5 306 aaPredicted RBP7.35□□□□□ -1.23
LINC00458-202ENST00000427299 DTLQ9NZJ0 730 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 CEP162Q5TB80 1403 aa7.35□□□□□ -1.23
LINC00458-202ENST00000427299 TCRBV5S2A0A599 114 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 HGSO14964 777 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-202ENST00000427299 SUV39H1O43463 412 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 CYP1A1P04798 512 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-202ENST00000427299 TACR2P21452 398 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 HOXC12P31275 282 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 MLLT6P55198 1093 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-202ENST00000427299 EMC4Q5J8M3 183 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 ZNF227Q86WZ6 799 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 RCBTB1Q8NDN9 531 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 DNERQ8NFT8 737 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 KISS1RQ969F8 398 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-202ENST00000427299 ANAPC16Q96DE5 110 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 TOE1Q96GM8 510 aaKnown RBP7.34□□□□□ -1.23
LINC00458-202ENST00000427299 ZSWIM3Q96MP5 696 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 TMEM168Q9H0V1 697 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 L2HGDHQ9H9P8 463 aa7.34□□□□□ -1.23
LINC00458-202ENST00000427299 COA3Q9Y2R0 106 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-202ENST00000427299 BAZ1BQ9UIG0 1483 aaKnown RBP7.34□□□□□ -1.23
LINC00458-202ENST00000427299 CEP164Q9UPV0 1460 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 GPR42O15529 346 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 MEFVO15553 781 aaPredicted RBP7.33□□□□□ -1.24
LINC00458-202ENST00000427299 TADA3O75528 432 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 ITGAVP06756 1048 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 SNRPB2P08579 225 aaKnown RBP7.33□□□□□ -1.24
LINC00458-202ENST00000427299 ECI1P42126 302 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 EPHB4P54760 987 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 CHRNA2Q15822 529 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 CRIP3Q6Q6R5 217 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 ZCCHC14Q8WYQ9 949 aaKnown RBP7.33□□□□□ -1.24
LINC00458-202ENST00000427299 CLIC6Q96NY7 704 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 PCDHB4Q9Y5E5 795 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 BIVM-ERCC5R4GMW8 1640 aa7.33□□□□□ -1.24
LINC00458-202ENST00000427299 H7BY64 318 aa7.32□□□□□ -1.24
LINC00458-202ENST00000427299 LRG1P02750 347 aa7.32□□□□□ -1.24
LINC00458-202ENST00000427299 SF1Q15637 639 aaKnown RBP7.32□□□□□ -1.24
LINC00458-202ENST00000427299 PRSS53Q2L4Q9 553 aa7.32□□□□□ -1.24
LINC00458-202ENST00000427299 STEAP3Q658P3 488 aa7.32□□□□□ -1.24
LINC00458-202ENST00000427299 IGDCC4Q8TDY8 1250 aa7.32□□□□□ -1.24
LINC00458-202ENST00000427299 C8orf37Q96NL8 207 aa7.32□□□□□ -1.24
LINC00458-202ENST00000427299 KLC2Q9H0B6 622 aa7.32□□□□□ -1.24
LINC00458-202ENST00000427299 WASF3Q9UPY6 502 aa7.32□□□□□ -1.24
LINC00458-202ENST00000427299 TNIKQ9UKE5 1360 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms