RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 KIAA0753Q2KHM9 967 aa20.53■□□□□ 0.88
GPC1-203ENST00000425056 LRRC8DQ7L1W4 858 aa20.53■□□□□ 0.88
GPC1-203ENST00000425056 FCHSD1Q86WN1 690 aa20.53■□□□□ 0.88
GPC1-203ENST00000425056 MTA3Q9BTC8 594 aa20.53■□□□□ 0.88
GPC1-203ENST00000425056 SPZ1Q9BXG8 430 aa20.53■□□□□ 0.88
GPC1-203ENST00000425056 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
GPC1-203ENST00000425056 LY9Q9HBG7 655 aa20.53■□□□□ 0.88
GPC1-203ENST00000425056 TTC28Q96AY4 2481 aa20.53■□□□□ 0.88
GPC1-203ENST00000425056 REV3LO60673 3130 aa20.52■□□□□ 0.88
GPC1-203ENST00000425056 PPFIA4O75335 1185 aa20.52■□□□□ 0.88
GPC1-203ENST00000425056 PARNO95453 639 aaKnown RBP20.52■□□□□ 0.88
GPC1-203ENST00000425056 CA3P07451 260 aa20.52■□□□□ 0.88
GPC1-203ENST00000425056 GPNMBQ14956 572 aa20.52■□□□□ 0.88
GPC1-203ENST00000425056 HSDL1Q3SXM5 330 aa20.52■□□□□ 0.88
GPC1-203ENST00000425056 ZNF654Q8IZM8 581 aa20.52■□□□□ 0.88
GPC1-203ENST00000425056 SYMPKQ92797 1274 aaKnown RBP20.52■□□□□ 0.88
GPC1-203ENST00000425056 SPATA33Q96N06 139 aa20.52■□□□□ 0.88
GPC1-203ENST00000425056 ALG1Q9BT22 464 aa20.52■□□□□ 0.88
GPC1-203ENST00000425056 MUC3AQ02505 3323 aa20.51■□□□□ 0.87
GPC1-203ENST00000425056 CKBP12277 381 aa20.51■□□□□ 0.87
GPC1-203ENST00000425056 IGFBP4P22692 258 aa20.51■□□□□ 0.87
GPC1-203ENST00000425056 SP2Q02086 613 aa20.51■□□□□ 0.87
GPC1-203ENST00000425056 PTK7Q13308 1070 aa20.51■□□□□ 0.87
GPC1-203ENST00000425056 TJAP1Q5JTD0 557 aa20.51■□□□□ 0.87
GPC1-203ENST00000425056 CTCFLQ8NI51 663 aaPredicted RBP20.51■□□□□ 0.87
GPC1-203ENST00000425056 GPKOWQ92917 476 aaPredicted RBP eCLIP20.51■□□□□ 0.87
GPC1-203ENST00000425056 PRDM6Q9NQX0 595 aa20.51■□□□□ 0.87
GPC1-203ENST00000425056 STAM2O75886 525 aa20.5■□□□□ 0.87
GPC1-203ENST00000425056 CXCL10P02778 98 aa20.5■□□□□ 0.87
GPC1-203ENST00000425056 KIF5BP33176 963 aa20.5■□□□□ 0.87
GPC1-203ENST00000425056 TRIM71Q2Q1W2 868 aaKnown RBP20.5■□□□□ 0.87
GPC1-203ENST00000425056 HERC6Q8IVU3 1022 aa20.5■□□□□ 0.87
GPC1-203ENST00000425056 PPM1EQ8WY54 764 aa20.5■□□□□ 0.87
GPC1-203ENST00000425056 INPP4AQ96PE3 977 aaPredicted RBP20.5■□□□□ 0.87
GPC1-203ENST00000425056 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
GPC1-203ENST00000425056 LSG1Q9H089 658 aaKnown RBP20.5■□□□□ 0.87
GPC1-203ENST00000425056 THEGQ9P2T0 379 aa20.5■□□□□ 0.87
GPC1-203ENST00000425056 DOCK5Q9H7D0 1870 aa20.5■□□□□ 0.87
GPC1-203ENST00000425056 PRC1O43663 620 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 SORBS3O60504 671 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 SMARCA1P28370 1054 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 ICAM3P32942 547 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 WDR5P61964 334 aaKnown RBP20.49■□□□□ 0.87
GPC1-203ENST00000425056 MRPS9P82933 396 aaKnown RBP20.49■□□□□ 0.87
GPC1-203ENST00000425056 GNPTABQ3T906 1256 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 CNKSR3Q6P9H4 555 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 TRAF7Q6Q0C0 670 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 PIBF1Q8WXW3 757 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 WNT8BQ93098 351 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 ZFP91Q96JP5 570 aaPredicted RBP20.49■□□□□ 0.87
GPC1-203ENST00000425056 C16orf70Q9BSU1 422 aa20.49■□□□□ 0.87
GPC1-203ENST00000425056 SH2B2O14492 632 aaPredicted RBP20.48■□□□□ 0.87
GPC1-203ENST00000425056 NBNO60934 754 aa20.48■□□□□ 0.87
GPC1-203ENST00000425056 MCM5P33992 734 aa20.48■□□□□ 0.87
GPC1-203ENST00000425056 KCNJ6P48051 423 aa20.48■□□□□ 0.87
GPC1-203ENST00000425056 HIC1Q14526 733 aa20.48■□□□□ 0.87
GPC1-203ENST00000425056 ATXN2LQ8WWM7 1075 aaKnown RBP20.48■□□□□ 0.87
GPC1-203ENST00000425056 RRP36Q96EU6 259 aaKnown RBP20.48■□□□□ 0.87
GPC1-203ENST00000425056 TMEM87BQ96K49 555 aa20.48■□□□□ 0.87
GPC1-203ENST00000425056 LZTS2Q9BRK4 669 aa20.48■□□□□ 0.87
GPC1-203ENST00000425056 ESYT1Q9BSJ8 1104 aa20.48■□□□□ 0.87
GPC1-203ENST00000425056 MLXIPQ9HAP2 919 aa20.48■□□□□ 0.87
GPC1-203ENST00000425056 KIF28PB7ZC32 967 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 PIK3CDO00329 1044 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 SLC27A2O14975 620 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 ARHGEF15O94989 841 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 HOXC8P31273 242 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 ZNF200P98182 395 aaPredicted RBP20.47■□□□□ 0.87
GPC1-203ENST00000425056 TAP1Q03518 808 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 SEMA3FQ13275 785 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 CCDC85BQ15834 202 aaPredicted RBP20.47■□□□□ 0.87
GPC1-203ENST00000425056 SERINC5Q86VE9 423 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 TMTC2Q8N394 836 aa20.47■□□□□ 0.87
GPC1-203ENST00000425056 SEC63Q9UGP8 760 aaKnown RBP20.47■□□□□ 0.87
GPC1-203ENST00000425056 COL4A4P53420 1690 aaPredicted RBP20.47■□□□□ 0.87
GPC1-203ENST00000425056 MEIS2O14770 477 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 FIBPO43427 364 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 PLEKHA8P1O95397 391 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 LGALS2P05162 132 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 POU3F3P20264 500 aaPredicted RBP20.46■□□□□ 0.87
GPC1-203ENST00000425056 LIFRP42702 1097 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 GNAQP50148 359 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 COL9A3Q14050 684 aaPredicted RBP20.46■□□□□ 0.87
GPC1-203ENST00000425056 ZNF618Q5T7W0 954 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 PCNX4Q63HM2 1172 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 METTL7BQ6UX53 244 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 BCAS3Q9H6U6 928 aa20.46■□□□□ 0.87
GPC1-203ENST00000425056 PRRC2BQ5JSZ5 2229 aaKnown RBP20.45■□□□□ 0.86
GPC1-203ENST00000425056 MICAL3Q7RTP6 2002 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 ABHD14A-ACY1A0A1B0GW23 586 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 CCDC69A6NI79 296 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 SPATA31C2B4DYI2 1134 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 H3BRB1 525 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 NOP56O00567 594 aaKnown RBP20.45■□□□□ 0.86
GPC1-203ENST00000425056 TLL1O43897 1013 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 DEFB103AP81534 67 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 NEDD9Q14511 834 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 MBTPS1Q14703 1052 aa20.45■□□□□ 0.86
GPC1-203ENST00000425056 NECTIN1Q15223 517 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms