RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ZNF286BP0CG31 522 aa21.3■■□□□ 1
NUP50-207ENST00000424634 UBA1P22314 1058 aaKnown RBP21.3■■□□□ 1
NUP50-207ENST00000424634 PSEN2P49810 448 aa21.3■■□□□ 1
NUP50-207ENST00000424634 PTGISQ16647 500 aa21.3■■□□□ 1
NUP50-207ENST00000424634 TMTC3Q6ZXV5 915 aa21.3■■□□□ 1
NUP50-207ENST00000424634 DHX32Q7L7V1 743 aaKnown RBP21.3■■□□□ 1
NUP50-207ENST00000424634 TET1Q8NFU7 2136 aa21.3■■□□□ 1
NUP50-207ENST00000424634 MYLIPQ8WY64 445 aa21.3■■□□□ 1
NUP50-207ENST00000424634 RTEL1Q9NZ71 1219 aa21.3■■□□□ 1
NUP50-207ENST00000424634 HDAC6Q9UBN7 1215 aa21.3■■□□□ 1
NUP50-207ENST00000424634 BRPF3Q9ULD4 1205 aa21.3■■□□□ 1
NUP50-207ENST00000424634 PRUNE2Q8WUY3 3088 aa21.3■■□□□ 1
NUP50-207ENST00000424634 GBF1Q92538 1859 aa21.3■■□□□ 1
NUP50-207ENST00000424634 DOCK5Q9H7D0 1870 aa21.3■■□□□ 1
NUP50-207ENST00000424634 MYO9BQ13459 2157 aa21.3■■□□□ 1
NUP50-207ENST00000424634 TMEM265A0A087WTH1 108 aa21.29■■□□□ 1
NUP50-207ENST00000424634 PPFIA4O75335 1185 aa21.29■■□□□ 1
NUP50-207ENST00000424634 F2P00734 622 aa21.29■■□□□ 1
NUP50-207ENST00000424634 IQCF3P0C7M6 154 aa21.29■■□□□ 1
NUP50-207ENST00000424634 SEMA3FQ13275 785 aa21.29■■□□□ 1
NUP50-207ENST00000424634 GRIN2CQ14957 1233 aa21.29■■□□□ 1
NUP50-207ENST00000424634 DEFB128Q7Z7B8 93 aa21.29■■□□□ 1
NUP50-207ENST00000424634 MICU3Q86XE3 530 aa21.29■■□□□ 1
NUP50-207ENST00000424634 SMARCC2Q8TAQ2 1214 aa21.29■■□□□ 1
NUP50-207ENST00000424634 SPATA33Q96N06 139 aa21.29■■□□□ 1
NUP50-207ENST00000424634 INPP4AQ96PE3 977 aaPredicted RBP21.29■■□□□ 1
NUP50-207ENST00000424634 ALG1Q9BT22 464 aa21.29■■□□□ 1
NUP50-207ENST00000424634 SPATA31C2B4DYI2 1134 aa21.28■■□□□ 1
NUP50-207ENST00000424634 PITPNM1O00562 1244 aa21.28■■□□□ 1
NUP50-207ENST00000424634 ICAM3P32942 547 aa21.28■■□□□ 1
NUP50-207ENST00000424634 MFSD10Q14728 455 aa21.28■■□□□ 1
NUP50-207ENST00000424634 KIAA0753Q2KHM9 967 aa21.28■■□□□ 1
NUP50-207ENST00000424634 APOA5Q6Q788 366 aa21.28■■□□□ 1
NUP50-207ENST00000424634 DHX38Q92620 1227 aaKnown RBP21.28■■□□□ 1
NUP50-207ENST00000424634 TIFAQ96CG3 184 aa21.28■■□□□ 1
NUP50-207ENST00000424634 GTF2IRD1Q9UHL9 959 aa21.28■■□□□ 1
NUP50-207ENST00000424634 HIC1Q14526 733 aa21.27■■□□□ 1
NUP50-207ENST00000424634 RETREG2Q8NC44 543 aa21.27■■□□□ 1
NUP50-207ENST00000424634 KCNB2Q92953 911 aa21.27■■□□□ 1
NUP50-207ENST00000424634 CUL5Q93034 780 aa21.27■■□□□ 1
NUP50-207ENST00000424634 C16orf70Q9BSU1 422 aa21.27■■□□□ 1
NUP50-207ENST00000424634 ZNF576Q9H609 170 aa21.27■■□□□ 1
NUP50-207ENST00000424634 PSTPIP2Q9H939 334 aa21.27■■□□□ 1
NUP50-207ENST00000424634 MLXIPQ9HAP2 919 aa21.27■■□□□ 1
NUP50-207ENST00000424634 NOD1Q9Y239 953 aa21.27■■□□□ 1
NUP50-207ENST00000424634 TELO2Q9Y4R8 837 aa21.27■■□□□ 1
NUP50-207ENST00000424634 TANC1Q9C0D5 1861 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 RBAK-RBAKDNI3L0D1 243 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 STAM2O75886 525 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 ZNF200P98182 395 aaPredicted RBP21.26■□□□□ 0.99
NUP50-207ENST00000424634 FUT2Q10981 343 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 BFSP2Q13515 415 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 GPNMBQ14956 572 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 PCNX4Q63HM2 1172 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 SYNE3Q6ZMZ3 975 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 C7orf31Q8N865 590 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 MTIF3Q9H2K0 278 aaKnown RBP21.26■□□□□ 0.99
NUP50-207ENST00000424634 CHD7Q9P2D1 2997 aa21.26■□□□□ 0.99
NUP50-207ENST00000424634 PFKMP08237 780 aa21.25■□□□□ 0.99
NUP50-207ENST00000424634 CPA1P15085 419 aa21.25■□□□□ 0.99
NUP50-207ENST00000424634 RFC2P35250 354 aa21.25■□□□□ 0.99
NUP50-207ENST00000424634 UBE2SQ16763 222 aa21.25■□□□□ 0.99
NUP50-207ENST00000424634 GNPTABQ3T906 1256 aa21.25■□□□□ 0.99
NUP50-207ENST00000424634 KATNAL1Q9BW62 490 aa21.25■□□□□ 0.99
NUP50-207ENST00000424634 FAM217BQ9NTX9 383 aaPredicted RBP21.25■□□□□ 0.99
NUP50-207ENST00000424634 YBX2Q9Y2T7 364 aaKnown RBP21.25■□□□□ 0.99
NUP50-207ENST00000424634 SLC4A7Q9Y6M7 1214 aa21.25■□□□□ 0.99
NUP50-207ENST00000424634 CNTNAP5Q8WYK1 1306 aa21.25■□□□□ 0.99
NUP50-207ENST00000424634 FIBPO43427 364 aa21.24■□□□□ 0.99
NUP50-207ENST00000424634 RABGGTBP53611 331 aa21.24■□□□□ 0.99
NUP50-207ENST00000424634 KRT32Q14532 448 aa21.24■□□□□ 0.99
NUP50-207ENST00000424634 XRRA1Q6P2D8 792 aa21.24■□□□□ 0.99
NUP50-207ENST00000424634 CYFIP1Q7L576 1253 aa21.24■□□□□ 0.99
NUP50-207ENST00000424634 CAGE1Q8TC20 777 aa21.24■□□□□ 0.99
NUP50-207ENST00000424634 WNT8BQ93098 351 aa21.24■□□□□ 0.99
NUP50-207ENST00000424634 ZBBXA8MT70 800 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 ZBTB43O43298 467 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 HSPA4P34932 840 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 NEDD9Q14511 834 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 RTN1Q16799 776 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 WWC2Q6AWC2 1192 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 TYW1BQ6NUM6 668 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 METTL7BQ6UX53 244 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 HEATR3Q7Z4Q2 680 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 AFAP1L1Q8TED9 768 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 NKX2-4Q9H2Z4 354 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 RBM28Q9NW13 759 aaKnown RBP21.23■□□□□ 0.99
NUP50-207ENST00000424634 SNX14Q9Y5W7 946 aa21.23■□□□□ 0.99
NUP50-207ENST00000424634 KLF18A0A0U1RQI7 1052 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 LGALS2P05162 132 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 CKBP12277 381 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 MYOGP15173 224 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 FOSL2P15408 326 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 CDC27P30260 824 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 RBL2Q08999 1139 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 RAB30Q15771 203 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 TRIM71Q2Q1W2 868 aaKnown RBP21.22■□□□□ 0.99
NUP50-207ENST00000424634 MAFAQ8NHW3 353 aaPredicted RBP21.22■□□□□ 0.99
NUP50-207ENST00000424634 GPR20Q99678 358 aa21.22■□□□□ 0.99
NUP50-207ENST00000424634 MSRAQ9UJ68 235 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms