RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 SEMA3FQ13275 785 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 WLSQ5T9L3 541 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 MEI1Q5TIA1 1274 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 C1orf131Q8NDD1 294 aaKnown RBP18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 CUEDC2Q9H467 287 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 PLCB1Q9NQ66 1216 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 GGA2Q9UJY4 613 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 ODF2LQ9ULJ1 636 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 SSU72P8A0A1W2PR75 194 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 RBAK-RBAKDNI3L0D1 243 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 OPLAHO14841 1288 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 ORC4O43929 436 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 CCNT1O60563 726 aaKnown RBP18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 KIF5BP33176 963 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 BYSLQ13895 437 aaKnown RBP18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 LRRC41Q15345 812 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 RPAINQ86UA6 219 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 PARP9Q8IXQ6 854 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 USP38Q8NB14 1042 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 TAF1DQ9H5J8 278 aaPredicted RBP18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 LRRC4CQ9HCJ2 640 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 COL4A1P02462 1669 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 MYMKA6NI61 221 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 TRAPPC3O43617 180 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 CYTH3O43739 400 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 OR52Z1P0C646 297 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 MYBP10242 640 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 FLT3P36888 993 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 IGHMBP2P38935 993 aaKnown RBP18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 NAB2Q15742 525 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 SNCBQ16143 134 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 ANKRD20A8PQ5CZ79 823 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 LRRC55Q6ZSA7 311 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 BANK1Q8NDB2 785 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 TBC1D5Q92609 795 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 SCLT1Q96NL6 688 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 MAGEF1Q9HAY2 307 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 DCP1AQ9NPI6 582 aaPredicted RBP18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 SH3GLB2Q9NR46 395 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 GRID2IPA4D2P6 1211 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 ECM2O94769 699 aaPredicted RBP18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 NF2P35240 595 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 PRPHP41219 470 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.35■□□□□ 0.53
NPC1L1-203ENST00000423141 NOL4O94818 638 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 PCP11498 1178 aaKnown RBP18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 CTNNA1P35221 906 aaKnown RBP18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 E2F5Q15329 346 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 DNAAF5Q86Y56 855 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 SEC16BQ96JE7 1060 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 ISCUQ9H1K1 167 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 IL17RBQ9NRM6 502 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 TPX2Q9ULW0 747 aaKnown RBP18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 A0A087X0T9 212 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 STXBP3O00186 592 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 KIF1CO43896 1103 aaKnown RBP18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 CLSTN1O94985 981 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 FAM228BP0C875 321 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 DRP2Q13474 957 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 SLC9C1Q4G0N8 1177 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 CHADLQ6NUI6 762 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 PNMA1Q8ND90 353 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 PCDHGC5Q9Y5F6 944 aa18.34■□□□□ 0.53
NPC1L1-203ENST00000423141 COL22A1Q8NFW1 1626 aaPredicted RBP18.33■□□□□ 0.53
NPC1L1-203ENST00000423141 LAD1O00515 517 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 KCNK3O14649 394 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 KIAA0753Q2KHM9 967 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 FAM83BQ5T0W9 1011 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 SFMBT2Q5VUG0 894 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 TMED8Q6PL24 325 aaPredicted RBP18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 AP1M1Q9BXS5 423 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 MAD2L2Q9UI95 211 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 TMEM59LQ9UK28 342 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 ZNF804BA4D1E1 1349 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 PHF20L1A8MW92 1017 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 SCTRP47872 440 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 POLR2FP61218 127 aaKnown RBP18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 TNNC1P63316 161 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 ODF2Q5BJF6 829 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 ARFGAP2Q8N6H7 521 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 RAPGEF5Q92565 580 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 AK8Q96MA6 479 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 ACTR5Q9H9F9 607 aaPredicted RBP18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 BLOC1S4Q9NUP1 217 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 ADAMTS1Q9UHI8 967 aa18.33■□□□□ 0.52
NPC1L1-203ENST00000423141 COL5A2P05997 1499 aaPredicted RBP18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 A0A1B0GUL6 1792 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 SRRM3A6NNA2 597 aaPredicted RBP18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 PPP1R2P41236 205 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 AMPD3Q01432 767 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 COBLL1Q53SF7 1204 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 LRIG3Q6UXM1 1119 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 SGSM3Q96HU1 749 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 FBXL5Q9UKA1 691 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms