RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 LSM14BQ9BX40 385 aaKnown RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 TAF1DQ9H5J8 278 aaPredicted RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 TNS3Q68CZ2 1445 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 NUP188Q5SRE5 1749 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 A0A087X0T9 212 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 FAM228BP0C875 321 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 ACCSLQ4AC99 568 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 SFMBT2Q5VUG0 894 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 PDXDC1Q6P996 788 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 YTHDF3Q7Z739 585 aaKnown RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 BAP1Q92560 729 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 THOC1Q96FV9 657 aaKnown RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 FER1L4A9Z1Z3 1794 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 EIF4E1BA6NMX2 242 aaKnown RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 TRAF5O00463 557 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 DAPK3O43293 454 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 KIF1CO43896 1103 aaKnown RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 ZNF844Q08AG5 666 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 UAP1Q16222 522 aaPredicted RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 CNNM4Q6P4Q7 775 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 C6orf89Q6UWU4 347 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 CCDC84Q86UT8 332 aaPredicted RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 DZIP3Q86Y13 1208 aaKnown RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 ZSCAN29Q8IWY8 852 aaPredicted RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 NELFCDQ8IXH7 590 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 HVCN1Q96D96 273 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 SGSM3Q96HU1 749 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 AMACRQ9UHK6 382 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 STX8Q9UNK0 236 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 PHRF1Q9P1Y6 1649 aaKnown RBP18.28■□□□□ 0.52
PKP4-204ENST00000421462 IGHMBP2P38935 993 aaKnown RBP18.28■□□□□ 0.52
PKP4-204ENST00000421462 CDK5RAP3Q96JB5 506 aa18.28■□□□□ 0.52
PKP4-204ENST00000421462 SELENOSQ9BQE4 189 aa18.28■□□□□ 0.52
PKP4-204ENST00000421462 CELF4Q9BZC1 486 aaKnown RBP18.28■□□□□ 0.52
PKP4-204ENST00000421462 CHRNDQ07001 517 aa18.28■□□□□ 0.52
PKP4-204ENST00000421462 RPS6KA1Q15418 735 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 FIGNQ5HY92 759 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 GKAP1Q5VSY0 366 aaPredicted RBP18.27■□□□□ 0.52
PKP4-204ENST00000421462 PIGBQ92521 554 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 RIOK1Q9BRS2 568 aaKnown RBP18.27■□□□□ 0.52
PKP4-204ENST00000421462 MTA3Q9BTC8 594 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 A1CFQ9NQ94 594 aaKnown RBP18.27■□□□□ 0.52
PKP4-204ENST00000421462 TLR2O60603 784 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 TNFRSF8P28908 595 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 KIF5BP33176 963 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 PPP2R2AP63151 447 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 TFAP4Q01664 338 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 FAM133BQ5BKY9 247 aaKnown RBP18.27■□□□□ 0.52
PKP4-204ENST00000421462 FAM83BQ5T0W9 1011 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 PPP4R3AQ6IN85 833 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 USP38Q8NB14 1042 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 RUBCNQ92622 972 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 CCSER1Q9C0I3 900 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 ZHX3Q9H4I2 956 aa18.27■□□□□ 0.52
PKP4-204ENST00000421462 TRAPPC3O43617 180 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 ITGA4P13612 1032 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 ATF3P18847 181 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 KLHL30Q0D2K2 578 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 HGSNATQ68CP4 663 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 TBC1D1Q86TI0 1168 aaPredicted RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 PNMA1Q8ND90 353 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 CALML4Q96GE6 196 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 CCDC113Q9H0I3 377 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 ATP8A1Q9Y2Q0 1164 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 L3MBTL1Q9Y468 752 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 ATXN2Q99700 1313 aaKnown RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 MYMKA6NI61 221 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 OR52Z1P0C646 297 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 DHX9Q08211 1270 aaKnown RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 KCNMA1Q12791 1236 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 MYO1EQ12965 1108 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 SV2BQ7L1I2 683 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 DYNLL2Q96FJ2 89 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 SART1O43290 800 aaKnown RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 BUB1BO60566 1050 aaPredicted RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 CTNND1O60716 968 aaKnown RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 HNRNPH3P31942 346 aaKnown RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 AMPD3Q01432 767 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 PRPF4BQ13523 1007 aaKnown RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 SUSD4Q5VX71 490 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 GJA10Q969M2 543 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 INPP4AQ96PE3 977 aaPredicted RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 ACTR5Q9H9F9 607 aaPredicted RBP18.26■□□□□ 0.51
PKP4-204ENST00000421462 MCM9Q9NXL9 1143 aa18.26■□□□□ 0.51
PKP4-204ENST00000421462 GRID2IPA4D2P6 1211 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 HSPA9P38646 679 aaKnown RBP18.25■□□□□ 0.51
PKP4-204ENST00000421462 PEX19P40855 299 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 EPS15P42566 896 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 NAPAP54920 295 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 NAIF1Q69YI7 327 aaPredicted RBP18.25■□□□□ 0.51
PKP4-204ENST00000421462 TSKSQ9UJT2 592 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 USP17L8P0C7I0 530 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 IL2RBP14784 551 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 GCFC2P16383 781 aaKnown RBP18.25■□□□□ 0.51
PKP4-204ENST00000421462 COPB2P35606 906 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms