RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CYP2C9P11712 490 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 CDC27P30260 824 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 ICAM3P32942 547 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 SP2Q02086 613 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 FUT2Q10981 343 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 NEDD9Q14511 834 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 PPP1R18Q6NYC8 613 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 NLRX1Q86UT6 975 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 DEFB123Q8N688 67 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
NUP50-204ENST00000417702 USP26Q9BXU7 913 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 EHMT1Q9H9B1 1298 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
NUP50-204ENST00000417702 UMODL1Q5DID0 1318 aa17.58■□□□□ 0.4
NUP50-204ENST00000417702 SPATA31C2B4DYI2 1134 aa17.58■□□□□ 0.4
NUP50-204ENST00000417702 CCL23P55773 120 aa17.58■□□□□ 0.4
NUP50-204ENST00000417702 UBE2SQ16763 222 aa17.58■□□□□ 0.4
NUP50-204ENST00000417702 PSRC1Q6PGN9 363 aaPredicted RBP17.58■□□□□ 0.4
NUP50-204ENST00000417702 TEX2Q8IWB9 1127 aa17.58■□□□□ 0.4
NUP50-204ENST00000417702 PPP1R13LQ8WUF5 828 aa17.58■□□□□ 0.4
NUP50-204ENST00000417702 KAT2BQ92831 832 aa17.58■□□□□ 0.4
NUP50-204ENST00000417702 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.58■□□□□ 0.47e-6■□□□□ 9.4
NUP50-204ENST00000417702 IL23AQ9NPF7 189 aa17.58■□□□□ 0.4
NUP50-204ENST00000417702 NOP56O00567 594 aaKnown RBP17.57■□□□□ 0.4
NUP50-204ENST00000417702 ZNF286BP0CG31 522 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 ACRP10323 421 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
NUP50-204ENST00000417702 ADD1P35611 737 aaKnown RBP17.57■□□□□ 0.4
NUP50-204ENST00000417702 PSEN2P49810 448 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 ADCY7P51828 1080 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 SMAD3P84022 425 aaKnown RBP17.57■□□□□ 0.4
NUP50-204ENST00000417702 MFSD10Q14728 455 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 PTGISQ16647 500 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 TMEM240Q5SV17 173 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 METTL7BQ6UX53 244 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 RUFY3Q7L099 469 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 SESTD1Q86VW0 696 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
NUP50-204ENST00000417702 C7orf31Q8N865 590 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 RETREG2Q8NC44 543 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 CDHR1Q96JP9 859 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 ALG1Q9BT22 464 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 AGXT2Q9BYV1 514 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 GLT8D2Q9H1C3 349 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 RIC8AQ9NPQ8 531 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 BARHL2Q9NY43 387 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 PCDHA6Q9UN73 950 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 PCDHA8Q9Y5H6 950 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 MYH7BA7E2Y1 1941 aa17.57■□□□□ 0.4
NUP50-204ENST00000417702 STXBP3O00186 592 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 F2P00734 622 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
NUP50-204ENST00000417702 BFSP2Q13515 415 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 KIAA0753Q2KHM9 967 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 FAM109BQ6ICB4 259 aaPredicted RBP17.56■□□□□ 0.4
NUP50-204ENST00000417702 ZNF365Q70YC5 407 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 C16orf59Q7L2K0 433 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
NUP50-204ENST00000417702 GPRASP2Q96D09 838 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 SENP7Q9BQF6 1050 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 WNT8AQ9H1J5 351 aa17.56■□□□□ 0.4
NUP50-204ENST00000417702 MTIF3Q9H2K0 278 aaKnown RBP17.56■□□□□ 0.4
NUP50-204ENST00000417702 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.55■□□□□ 0.4
NUP50-204ENST00000417702 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.55■□□□□ 0.4
NUP50-204ENST00000417702 SMCO2A6NFE2 343 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 FOSP01100 380 aaPredicted RBP17.55■□□□□ 0.4
NUP50-204ENST00000417702 FGBP02675 491 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 SEMA3FQ13275 785 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 PFKFB3Q16875 520 aaPredicted RBP17.55■□□□□ 0.4
NUP50-204ENST00000417702 ZNF697Q5TEC3 545 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 TYW1BQ6NUM6 668 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 Q7L0L9 218 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 CYFIP1Q7L576 1253 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 CCDC155Q8N6L0 562 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 SCLYQ96I15 445 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 TM6SF1Q9BZW5 370 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 HDAC6Q9UBN7 1215 aa17.55■□□□□ 0.4
NUP50-204ENST00000417702 HAS3O00219 553 aa17.54■□□□□ 0.4
NUP50-204ENST00000417702 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
NUP50-204ENST00000417702 SCG2P13521 617 aa17.54■□□□□ 0.4
NUP50-204ENST00000417702 EVCP57679 992 aa17.54■□□□□ 0.4
NUP50-204ENST00000417702 GDF6Q6KF10 455 aaPredicted RBP17.54■□□□□ 0.4
NUP50-204ENST00000417702 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
NUP50-204ENST00000417702 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
NUP50-204ENST00000417702 NID2Q14112 1375 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 PRPF3O43395 683 aaKnown RBP17.53■□□□□ 0.4
NUP50-204ENST00000417702 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
NUP50-204ENST00000417702 PFKMP08237 780 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 ITGB5P18084 799 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
NUP50-204ENST00000417702 AP3B2Q13367 1082 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 MTMR1Q13613 665 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 HERVK_113Q902F9 699 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 GPR20Q99678 358 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms