RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 MRPS9P82933 396 aaKnown RBP18.02■□□□□ 0.48
MCF2L-211ENST00000413354 NEDD9Q14511 834 aa18.02■□□□□ 0.48
MCF2L-211ENST00000413354 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
MCF2L-211ENST00000413354 PSRC1Q6PGN9 363 aaPredicted RBP18.02■□□□□ 0.48
MCF2L-211ENST00000413354 SPATA33Q96N06 139 aa18.02■□□□□ 0.48
MCF2L-211ENST00000413354 NOC4LQ9BVI4 516 aaKnown RBP18.02■□□□□ 0.48
MCF2L-211ENST00000413354 USP26Q9BXU7 913 aa18.02■□□□□ 0.48
MCF2L-211ENST00000413354 MLXIPQ9HAP2 919 aa18.02■□□□□ 0.48
MCF2L-211ENST00000413354 TRMT13Q9NUP7 481 aaKnown RBP18.02■□□□□ 0.48
MCF2L-211ENST00000413354 CYP46A1Q9Y6A2 500 aa18.02■□□□□ 0.48
MCF2L-211ENST00000413354 V9GY48 417 aaPredicted RBP18.02■□□□□ 0.48
MCF2L-211ENST00000413354 PPFIA4O75335 1185 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 F2P00734 622 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 CDC27P30260 824 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 CYP2C18P33260 490 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 ADCY7P51828 1080 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 UBE2SQ16763 222 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 RUFY3Q7L099 469 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 SESTD1Q86VW0 696 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 CDHR1Q96JP9 859 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 TM6SF1Q9BZW5 370 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 FAM217BQ9NTX9 383 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-211ENST00000413354 BARHL2Q9NY43 387 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 NOD1Q9Y239 953 aa18.01■□□□□ 0.47
MCF2L-211ENST00000413354 TRIP12Q14669 1992 aaPredicted RBP18■□□□□ 0.47
MCF2L-211ENST00000413354 SPATA31C2B4DYI2 1134 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 NOP56O00567 594 aaKnown RBP18■□□□□ 0.47
MCF2L-211ENST00000413354 CSF2RAP15509 400 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 EPHB4P54760 987 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 CHMP4BP1P59074 171 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 METTL7BQ6UX53 244 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 CCDC155Q8N6L0 562 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 GIMAP8Q8ND71 665 aaPredicted RBP18■□□□□ 0.47
MCF2L-211ENST00000413354 KAT2BQ92831 832 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 GPRASP2Q96D09 838 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 ZFP91Q96JP5 570 aaPredicted RBP18■□□□□ 0.47
MCF2L-211ENST00000413354 SENP7Q9BQF6 1050 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 MTIF3Q9H2K0 278 aaKnown RBP18■□□□□ 0.47
MCF2L-211ENST00000413354 ZSWIM6Q9HCJ5 1215 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 RIC8AQ9NPQ8 531 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 RTEL1Q9NZ71 1219 aa18■□□□□ 0.47
MCF2L-211ENST00000413354 KAT6AQ92794 2004 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 STXBP3O00186 592 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 FOSP01100 380 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-211ENST00000413354 ZNF286BP0CG31 522 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 ADD1P35611 737 aaKnown RBP17.99■□□□□ 0.47
MCF2L-211ENST00000413354 PSEN2P49810 448 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 EVCP57679 992 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 AKAP17AQ02040 695 aaKnown RBP17.99■□□□□ 0.47
MCF2L-211ENST00000413354 SP2Q02086 613 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 MFSD10Q14728 455 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 PFKFB3Q16875 520 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-211ENST00000413354 HSDL1Q3SXM5 330 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 CCDC12Q8WUD4 166 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-211ENST00000413354 IL23AQ9NPF7 189 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 PCDHA6Q9UN73 950 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 PCDHA8Q9Y5H6 950 aa17.99■□□□□ 0.47
MCF2L-211ENST00000413354 PITPNM1O00562 1244 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 CYP2C9P11712 490 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 SCG2P13521 617 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 SMAD3P84022 425 aaKnown RBP17.98■□□□□ 0.47
MCF2L-211ENST00000413354 SEMA3FQ13275 785 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 AP3B2Q13367 1082 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 BFSP2Q13515 415 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 TMEM240Q5SV17 173 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 FAM109BQ6ICB4 259 aaPredicted RBP17.98■□□□□ 0.47
MCF2L-211ENST00000413354 RPUSD2Q8IZ73 545 aaKnown RBP17.98■□□□□ 0.47
MCF2L-211ENST00000413354 C7orf31Q8N865 590 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.98■□□□□ 0.478e-7■■■□□ 15.2
MCF2L-211ENST00000413354 SCN5AQ14524 2016 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 UMODL1Q5DID0 1318 aa17.98■□□□□ 0.47
MCF2L-211ENST00000413354 ESYT2A0FGR8 921 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 SMCO2A6NFE2 343 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 HAS3O00219 553 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 PRPF3O43395 683 aaKnown RBP17.97■□□□□ 0.47
MCF2L-211ENST00000413354 SORBS3O60504 671 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 PFKMP08237 780 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 CCL23P55773 120 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 PTGISQ16647 500 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 KIAA0753Q2KHM9 967 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 TYW1BQ6NUM6 668 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 CYFIP1Q7L576 1253 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 DEFB123Q8N688 67 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 RETREG2Q8NC44 543 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 CAGE1Q8TC20 777 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 ALG1Q9BT22 464 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 RNF26Q9BY78 433 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-211ENST00000413354 WNT8AQ9H1J5 351 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 GTF2IRD1Q9UHL9 959 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 SZT2Q5T011 3432 aa17.97■□□□□ 0.47
MCF2L-211ENST00000413354 MAFGO15525 162 aa17.96■□□□□ 0.47
MCF2L-211ENST00000413354 PDIA3P30101 505 aaKnown RBP17.96■□□□□ 0.47
MCF2L-211ENST00000413354 RFC2P35250 354 aa17.96■□□□□ 0.47
MCF2L-211ENST00000413354 MTMR1Q13613 665 aa17.96■□□□□ 0.47
MCF2L-211ENST00000413354 MCTP2Q6DN12 878 aa17.96■□□□□ 0.47
MCF2L-211ENST00000413354 ANO3Q9BYT9 981 aa17.96■□□□□ 0.47
MCF2L-211ENST00000413354 ZNF215Q9UL58 517 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-211ENST00000413354 UBIAD1Q9Y5Z9 338 aa17.96■□□□□ 0.47
MCF2L-211ENST00000413354 LGALS2P05162 132 aa17.95■□□□□ 0.46
MCF2L-211ENST00000413354 ACRP10323 421 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms