RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 BBS9Q3SYG4 887 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 IZUMO3Q5VZ72 239 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 NUGGCQ68CJ6 796 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 PGBD2Q6P3X8 592 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 LILRA6Q6PI73 481 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 CCDC73Q6ZRK6 1079 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 RASGRP2Q7LDG7 609 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 GRAMD1CQ8IYS0 662 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 CCDC116Q8IYX3 515 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 RADILQ96JH8 1075 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 ASB2Q96Q27 587 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 BAG1Q99933 345 aaPredicted RBP6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 TREX2Q9BQ50 279 aaPredicted RBP6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 THG1LQ9NWX6 298 aaKnown RBP6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 ZDHHC3Q9NYG2 299 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 GGA3Q9NZ52 723 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 CEP72Q9P209 647 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 HPS5Q9UPZ3 1129 aa6.72□□□□□ -1.33
CBX1P3-201ENST00000413296 SLC22A31A6NKX4 558 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 A6NLC8 198 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 ARHGAP33O14559 1287 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 TLL1O43897 1013 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 ZBED4O75132 1171 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 GLRX3O76003 335 aaKnown RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CAPNS1P04632 268 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 RAG1P15918 1043 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 XBP1P17861 261 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 PIK3CBP42338 1070 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 NPTX2P47972 431 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 PMS1P54277 932 aaKnown RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 KCNC4Q03721 635 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 PRKG1Q13976 671 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 TRIM29Q14134 588 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 SPARCL1Q14515 664 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 PKN2Q16513 984 aaKnown RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 MEA1Q16626 185 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 ANKRD45Q5TZF3 282 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 RNF220Q5VTB9 566 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 FAM205BPQ63HN1 556 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CATSPER4Q7RTX7 472 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 WAPLQ7Z5K2 1190 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 MILR1Q7Z6M3 343 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 ARHGEF25Q86VW2 580 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 TMTC1Q8IUR5 882 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CEP57L1Q8IYX8 460 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CAMKK1Q8N5S9 505 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 ZNF513Q8N8E2 541 aaPredicted RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 AIDAQ96BJ3 306 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 TRIM11Q96F44 468 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CFAP53Q96M91 514 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 ADPGKQ9BRR6 497 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 TMEM120AQ9BXJ8 343 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 GTPBP4Q9BZE4 634 aaKnown RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CCDC68Q9H2F9 335 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CBX8Q9HC52 389 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 DMRT3Q9NQL9 472 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 OLA1Q9NTK5 396 aaKnown RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 CFDP1Q9UEE9 299 aaPredicted RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 HDAC5Q9UQL6 1122 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 IFT140Q96RY7 1462 aa6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 URB2Q14146 1524 aaKnown RBP6.71□□□□□ -1.34
CBX1P3-201ENST00000413296 BLACEA4D250 179 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 ADAMTS3O15072 1205 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 POLBP06746 335 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 ATP1A3P13637 1013 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 TATP17735 454 aaPredicted RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 CNTFP26441 200 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 TNNT2P45379 298 aaPredicted RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 PAPOLAP51003 745 aaKnown RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 KPNA1P52294 538 aaPredicted RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 MAPK10P53779 464 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 CACNB3P54284 484 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 COPS2P61201 443 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 DCAF7P61962 342 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 TMF1P82094 1093 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 PTPN11Q06124 597 aaPredicted RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 SLC27A3Q5K4L6 730 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 CDCP2Q5VXM1 449 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 MAMDC2Q7Z304 686 aaPredicted RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 IQCA1Q86XH1 822 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 NCAPG2Q86XI2 1143 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 GALNT13Q8IUC8 556 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 KIAA0319LQ8IZA0 1049 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 SAMD14Q8IZD0 417 aaPredicted RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 MIER2Q8N344 545 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 OR13H1Q8NG92 308 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 CHTF18Q8WVB6 975 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 UCMAQ8WVF2 138 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 N4BP2L2Q92802 583 aaPredicted RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 NLRP3Q96P20 1036 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 LGR4Q9BXB1 951 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 STK31Q9BXU1 1019 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 ZNF277Q9NRM2 450 aaPredicted RBP6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 DCAF16Q9NXF7 216 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 REV1Q9UBZ9 1251 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 SLC13A4Q9UKG4 626 aa6.7□□□□□ -1.34
CBX1P3-201ENST00000413296 MKL2Q9ULH7 1088 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms