RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 PABPC4Q13310 644 aaKnown RBP eCLIP8.36□□□□□ -1.07
NR1I3-208ENST00000412844 COL9A3Q14050 684 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-208ENST00000412844 FAM110CQ1W6H9 321 aa8.36□□□□□ -1.07
NR1I3-208ENST00000412844 ADAMTSL4Q6UY14 1074 aa8.36□□□□□ -1.07
NR1I3-208ENST00000412844 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
NR1I3-208ENST00000412844 SCYL3Q8IZE3 742 aa8.36□□□□□ -1.07
NR1I3-208ENST00000412844 WNT8BQ93098 351 aa8.36□□□□□ -1.07
NR1I3-208ENST00000412844 PAWRQ96IZ0 340 aaKnown RBP8.36□□□□□ -1.07
NR1I3-208ENST00000412844 CEP44Q9C0F1 390 aa8.36□□□□□ -1.07
NR1I3-208ENST00000412844 STK17AQ9UEE5 414 aa8.36□□□□□ -1.07
NR1I3-208ENST00000412844 GPN3Q9UHW5 284 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-208ENST00000412844 RPTORQ8N122 1335 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 AK9Q5TCS8 1911 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 FSCN2O14926 492 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 ENTPD3O75355 529 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-208ENST00000412844 PPP2R3AQ06190 1150 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 C19orf57Q0VDD7 668 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 CHAF1AQ13111 956 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-208ENST00000412844 MOGSQ13724 837 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 MRPL58Q14197 206 aaKnown RBP8.35□□□□□ -1.07
NR1I3-208ENST00000412844 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
NR1I3-208ENST00000412844 METTL24Q5JXM2 366 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 GPAT2Q6NUI2 795 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 MIGA2Q7L4E1 593 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 ZGPATQ8N5A5 531 aaKnown RBP8.35□□□□□ -1.07
NR1I3-208ENST00000412844 C3orf58Q8NDZ4 430 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 TSR2Q969E8 191 aaKnown RBP8.35□□□□□ -1.07
NR1I3-208ENST00000412844 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.35□□□□□ -1.07
NR1I3-208ENST00000412844 MTMR10Q9NXD2 777 aa8.35□□□□□ -1.07
NR1I3-208ENST00000412844 A0A0A0MRY4 1105 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 CTNND1O60716 968 aaKnown RBP8.34□□□□□ -1.07
NR1I3-208ENST00000412844 MAP4K4O95819 1239 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-208ENST00000412844 CYP2C8P10632 490 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 CACNB3P54284 484 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 TSNAXIP1Q2TAA8 658 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 RABL6Q3YEC7 729 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-208ENST00000412844 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
NR1I3-208ENST00000412844 KLHL23Q8NBE8 558 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 C11orf49Q9H6J7 331 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 OSGEPQ9NPF4 335 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
NR1I3-208ENST00000412844 GABRQQ9UN88 632 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 AGTPBP1Q9UPW5 1226 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 LRRFIP2Q9Y608 721 aaKnown RBP8.34□□□□□ -1.07
NR1I3-208ENST00000412844 ZHX2Q9Y6X8 837 aa8.34□□□□□ -1.07
NR1I3-208ENST00000412844 UTYO14607 1347 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 SALL1Q9NSC2 1324 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 E9PSI1 815 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 VAMP4O75379 141 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 B3GALT4O96024 378 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 SLC5A1P13866 664 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 ELNP15502 786 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 VAMP1P23763 118 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 SETDB1Q15047 1291 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 WDR63Q8IWG1 891 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 C7orf61Q8IZ16 206 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 SOCS4Q8WXH5 440 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 LPIN2Q92539 896 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 IDI2Q9BXS1 227 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 SOX17Q9H6I2 414 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-208ENST00000412844 TMEM39AQ9NV64 488 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 OGDHLQ9ULD0 1010 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 AFG3L2Q9Y4W6 797 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 MYH13Q9UKX3 1938 aa8.33□□□□□ -1.08
NR1I3-208ENST00000412844 FANCIQ9NVI1 1328 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 DOCK2Q92608 1830 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 FBXO24O75426 580 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 MAGEA10P43363 369 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-208ENST00000412844 GSTM4Q03013 218 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-208ENST00000412844 EPHA10Q5JZY3 1008 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 CDC42EP5Q6NZY7 148 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 GADL1Q6ZQY3 521 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 FBXO11Q86XK2 927 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 FMR1NBQ8N0W7 255 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-208ENST00000412844 VGLL2Q8N8G2 317 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 TMEM87AQ8NBN3 555 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 DAGLAQ9Y4D2 1042 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 ALPK3Q96L96 1907 aa8.32□□□□□ -1.08
NR1I3-208ENST00000412844 PTPRFP10586 1907 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 CTSHP09668 335 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 SPATA31C1P0DKV0 1188 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 CD68P34810 354 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-208ENST00000412844 ST13P50502 369 aaKnown RBP8.31□□□□□ -1.08
NR1I3-208ENST00000412844 TCP10Q12799 353 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 SUZ12Q15022 739 aaKnown RBP8.31□□□□□ -1.08
NR1I3-208ENST00000412844 ZNF423Q2M1K9 1284 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 MEI1Q5TIA1 1274 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 ALYREFQ86V81 257 aaKnown RBP8.31□□□□□ -1.08
NR1I3-208ENST00000412844 ANKRD13CQ8N6S4 541 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 BACH2Q9BYV9 841 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 OSBPL5Q9H0X9 879 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-208ENST00000412844 USP40Q9NVE5 1235 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 DENND2AQ9ULE3 1009 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 HDAC5Q9UQL6 1122 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 SAMM50Q9Y512 469 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 DOCK1Q14185 1865 aa8.31□□□□□ -1.08
NR1I3-208ENST00000412844 ATRNL1Q5VV63 1379 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms