RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 VPS52Q8N1B4 723 aa15.18■□□□□ 0.02
CLTCL1-201ENST00000412649 ERMNQ8TAM6 284 aa15.18■□□□□ 0.02
CLTCL1-201ENST00000412649 KCNV2Q8TDN2 545 aa15.18■□□□□ 0.02
CLTCL1-201ENST00000412649 CTTNBP2NLQ9P2B4 639 aa15.18■□□□□ 0.02
CLTCL1-201ENST00000412649 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 EVI5O60447 810 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 ABCB4P21439 1286 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 TOB1P50616 345 aaPredicted RBP15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 LRRC23Q53EV4 343 aaPredicted RBP15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 AGBL2Q5U5Z8 902 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 SLC30A9Q6PML9 568 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 STXBP4Q6ZWJ1 553 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 ZCRB1Q8TBF4 217 aaKnown RBP15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 ECT2Q9H8V3 914 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 CAPN6Q9Y6Q1 641 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 RASGRF2O14827 1237 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 RCAN1P53805 252 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 SLC8A3P57103 927 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 CALCRLQ16602 461 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 TTMPQ5BVD1 217 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 FAM47AQ5JRC9 791 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 SMC6Q96SB8 1091 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 KIF9Q9HAQ2 790 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 EIF4E1BA6NMX2 242 aaKnown RBP15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 C10orf76Q5T2E6 689 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 MEX3CQ5U5Q3 659 aaKnown RBP15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 FUKQ8N0W3 1084 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 XPO6Q96QU8 1125 aaKnown RBP15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 MROH5Q6ZUA9 1318 aa15.17■□□□□ 0.02
CLTCL1-201ENST00000412649 PDE8BO95263 885 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 TSEN2Q8NCE0 465 aaKnown RBP15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 A1CFQ9NQ94 594 aaKnown RBP15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 SKAP2O75563 359 aaPredicted RBP15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 ATP2A2P16615 1042 aaKnown RBP15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 FKBP3Q00688 224 aaKnown RBP15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 SCARF1Q14162 830 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 KCNB1Q14721 858 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 CDC37Q16543 378 aaPredicted RBP15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 ANKRD20A8PQ5CZ79 823 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 GSTA5Q7RTV2 222 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 STAG2Q8N3U4 1231 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 OSBPL1AQ9BXW6 950 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 CHD1O14646 1710 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 CEMIPQ8WUJ3 1361 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 ABL1P00519 1130 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 IRAK4Q9NWZ3 460 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 PCDHA4Q9UN74 947 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 STAT1P42224 750 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 DR1Q01658 176 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 ZNF365Q70YC5 407 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 RIC8AQ9NPQ8 531 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 COL4A3BPQ9Y5P4 624 aa15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 CEP170BQ9Y4F5 1589 aaPredicted RBP15.16■□□□□ 0.02
CLTCL1-201ENST00000412649 RASSF10A6NK89 507 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 ATP2A1O14983 1001 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 RAD51CO43502 376 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 PDE8AO60658 829 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 PCCAP05165 728 aaPredicted RBP15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 CCND1P24385 295 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 GSCP56915 257 aaPredicted RBP15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 HHATQ5VTY9 493 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 SYCP3Q8IZU3 236 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 ARHGAP24Q8N264 748 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 ATXN2Q99700 1313 aaKnown RBP15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 DAPK3O43293 454 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 CIB2O75838 187 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 PDHA1P08559 390 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 POTEJP0CG39 1038 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 RWDD2BP57060 319 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 LRRC63Q05C16 580 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 RCSD1Q6JBY9 416 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 BICDL1Q6ZP65 573 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 MCM8Q9UJA3 840 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 PDE2AO00408 941 aaPredicted RBP15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 KLK7P49862 253 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 FAM26FQ5R3K3 315 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 GALNT17Q6IS24 598 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 LCORLQ8N3X6 602 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 TMBIM4Q9HC24 238 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 CEP72Q9P209 647 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 ARMCX3Q9UH62 379 aaPredicted RBP15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 USP17L12C9JPN9 530 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 USP17L21D6R901 530 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 ANP32DO95626 131 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 HSD17B3P37058 310 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 SH3BGRP55822 239 aaPredicted RBP15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 FOXO4P98177 505 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 SEMA3FQ13275 785 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 ALX1Q15699 326 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 TRPM8Q7Z2W7 1104 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 CASKIN2Q8WXE0 1202 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 IKBKGQ9Y6K9 419 aa15.15■□□□□ 0.02
CLTCL1-201ENST00000412649 SKIP12755 728 aa15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
CLTCL1-201ENST00000412649 PHLDB3Q6NSJ2 640 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms