RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 PABPC4Q13310 644 aaKnown RBP eCLIP5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 SETDB1Q15047 1291 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 SHHQ15465 462 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 GPR142Q7Z601 462 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 ATCAYQ86WG3 371 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 MAP4K3Q8IVH8 894 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 Q8N3U1 123 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 USP38Q8NB14 1042 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 WFDC12Q8WWY7 111 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 USP44Q9H0E7 712 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 DNAJC18Q9H819 358 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 FLRT1Q9NZU1 646 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 ABCF2Q9UG63 623 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 RAPGEFL1Q9UHV5 662 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 PA2G4Q9UQ80 394 aaKnown RBP5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 PLXNA1Q9UIW2 1896 aa5.54□□□□□ -1.52
RNU4-25P-201ENST00000410569 COL11A1P12107 1806 aaPredicted RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 MYH8P13535 1937 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 GPR75-ASB3A0A0A6YYF3 556 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 CIAO1O76071 339 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 CYP2E1P05181 493 aaPredicted RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 MAPK4P31152 587 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 HOXA7P31268 230 aaPredicted RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 RGS2P41220 211 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 RTP1P59025 263 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 ATP11AP98196 1134 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 MECOMQ03112 1051 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 PDE3AQ14432 1141 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 XKR5Q6UX68 686 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 PI16Q6UXB8 463 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 ZGPATQ8N5A5 531 aaKnown RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 GTF3C2Q8WUA4 911 aaPredicted RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 EDEM1Q92611 657 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 P2RX7Q99572 595 aaKnown RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 LBHD1Q9BQE6 289 aaPredicted RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 PAGR1Q9BTK6 254 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 SENP6Q9GZR1 1112 aaPredicted RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 MUC3BQ9H195 1237 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 GNL3LQ9NVN8 582 aaKnown RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 TMEM63CQ9P1W3 806 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 RBPJLQ9UBG7 517 aa5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.53□□□□□ -1.52
RNU4-25P-201ENST00000410569 PTPRCP08575 1304 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 DNM1LO00429 736 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 CNMDO75829 334 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 PDGFAP04085 211 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 FOSL2P15408 326 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 NPR3P17342 541 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 MPSTP25325 297 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 EIF1AXP47813 144 aaKnown RBP5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 BACE1P56817 501 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 FOXD4L6Q3SYB3 417 aaPredicted RBP5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 TRIM60Q495X7 471 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 PRSS36Q5K4E3 855 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 ZMYM1Q5SVZ6 1142 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 PHLDB3Q6NSJ2 640 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 FOXD4L3Q6VB84 417 aaPredicted RBP5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 ZNF438Q7Z4V0 828 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 PLEKHH3Q7Z736 793 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 TMEM130Q8N3G9 435 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 CEP120Q8N960 986 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 TRPV1Q8NER1 839 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 GPRC5AQ8NFJ5 357 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 NPLOC4Q8TAT6 608 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 TP53INP1Q96A56 240 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 SPACA7Q96KW9 195 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 WDR18Q9BV38 432 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 MRPL18Q9H0U6 180 aaKnown RBP5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 RASSF4Q9H2L5 321 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 AS3MTQ9HBK9 375 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 PRDM5Q9NQX1 630 aaPredicted RBP5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 PDLIM7Q9NR12 457 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 TMOD4Q9NZQ9 345 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 CNTN3Q9P232 1028 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 DDX20Q9UHI6 824 aaKnown RBP5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 HERC5Q9UII4 1024 aaKnown RBP5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 ZBTB21Q9ULJ3 1066 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 ATP11BQ9Y2G3 1177 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 PPME1Q9Y570 386 aa5.52□□□□□ -1.53
RNU4-25P-201ENST00000410569 FLT1P17948 1338 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 ZNF521Q96K83 1311 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 REV3LO60673 3130 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 ZNFX1Q9P2E3 1918 aaKnown RBP5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 A0A1B0GUL7 405 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 SMNDC1O75940 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 IGHA2P01877 340 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 ASNSP08243 561 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 CYBAP13498 195 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 MZF1P28698 734 aaPredicted RBP5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 CYP2C19P33261 490 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 IL15P40933 162 aaPredicted RBP5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 EPHB4P54760 987 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 SMAD3P84022 425 aaKnown RBP5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 DNM1Q05193 864 aaKnown RBP5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 GRB14Q14449 540 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 SNX17Q15036 470 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 GJC2Q5T442 439 aaPredicted RBP5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 ANO1Q5XXA6 986 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 CEP135Q66GS9 1140 aa5.51□□□□□ -1.53
RNU4-25P-201ENST00000410569 ADAMTSL4Q6UY14 1074 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms