RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 SPATA31A6Q5VVP1 1343 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 HNRNPH2P55795 449 aaKnown RBP17.6■□□□□ 0.41
HOXD3-202ENST00000410016 FKBP3Q00688 224 aaKnown RBP17.6■□□□□ 0.41
HOXD3-202ENST00000410016 HHIPL2Q6UWX4 724 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 ZFPM1Q8IX07 1006 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 EDEM3Q9BZQ6 932 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 DNAJC18Q9H819 358 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 JADE2Q9NQC1 790 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 PANK4Q9NVE7 773 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USO1O60763 962 aaKnown RBP17.6■□□□□ 0.41
HOXD3-202ENST00000410016 ATP2B2Q01814 1243 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 HGSNATQ68CP4 663 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L6PQ6QN14 398 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 TXLNBQ8N3L3 684 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 ZBTB9Q96C00 473 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 TSG101Q99816 390 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 MLXIPQ9HAP2 919 aa17.6■□□□□ 0.41
HOXD3-202ENST00000410016 PRLRP16471 622 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 SLC27A3Q5K4L6 730 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 FAM26FQ5R3K3 315 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 NT5C3AQ9H0P0 336 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 EHD4Q9H223 541 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 KCNMB3Q9NPA1 279 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 SALL4Q9UJQ4 1053 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 COL4A3BPQ9Y5P4 624 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 E9PMD0 336 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 MPHOSPH10O00566 681 aaKnown RBP17.59■□□□□ 0.41
HOXD3-202ENST00000410016 NOL4O94818 638 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 MCM3P25205 808 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 PDXDC1Q6P996 788 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 ARHGAP27Q6ZUM4 889 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 VIPAS39Q9H9C1 493 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 CALCOCO1Q9P1Z2 691 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 VPS18Q9P253 973 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
HOXD3-202ENST00000410016 QSER1Q2KHR3 1735 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 CYP3A7-CYP3A51PA0A087WV96 503 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 PJA2O43164 708 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 AKR1B10O60218 316 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 TACC1O75410 805 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 MOCS3O95396 460 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 CYP3A7P24462 503 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 USP11P51784 963 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.41
HOXD3-202ENST00000410016 ZNF572Q7Z3I7 529 aaPredicted RBP17.58■□□□□ 0.41
HOXD3-202ENST00000410016 MKL1Q969V6 931 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 CCDC17Q96LX7 622 aa17.58■□□□□ 0.41
HOXD3-202ENST00000410016 SSU72P8A0A1W2PR75 194 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 TRAF5O00463 557 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 HLA-DOAP06340 250 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 QRICH1Q2TAL8 776 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 COG1Q8WTW3 980 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 TEKT1Q969V4 418 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 MBOAT7Q96N66 472 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 UIMC1Q96RL1 719 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 DEF6Q9H4E7 631 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 BMP2KQ9NSY1 1161 aaPredicted RBP17.58■□□□□ 0.4
HOXD3-202ENST00000410016 FAN1Q9Y2M0 1017 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 MYH7BA7E2Y1 1941 aa17.58■□□□□ 0.4
HOXD3-202ENST00000410016 GREB1LQ9C091 1923 aaPredicted RBP17.58■□□□□ 0.4
HOXD3-202ENST00000410016 ZC3H4Q9UPT8 1303 aaKnown RBP17.57■□□□□ 0.4
HOXD3-202ENST00000410016 KDM3AQ9Y4C1 1321 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 MARCH6O60337 910 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 ZMYND10O75800 440 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 PLA2G4BP0C869 781 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 MARSP56192 900 aaKnown RBP17.57■□□□□ 0.4
HOXD3-202ENST00000410016 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
HOXD3-202ENST00000410016 CCNI2Q6ZMN8 369 aaPredicted RBP17.57■□□□□ 0.4
HOXD3-202ENST00000410016 GPIHBP1Q8IV16 184 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 CRYGNQ8WXF5 182 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 CEP63Q96MT8 703 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 NAP1L4Q99733 375 aaKnown RBP17.57■□□□□ 0.4
HOXD3-202ENST00000410016 KCTD10Q9H3F6 313 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 TBC1D7Q9P0N9 293 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 POTEB3A0JP26 581 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 POTECB2RU33 542 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 RBAK-RBAKDNI3L0D1 243 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 TLR2O60603 784 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 MYBL2P10244 700 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 CYP11B2P19099 503 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 MAGEA1P43355 309 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 AARSP49588 968 aaKnown RBP eCLIP17.57■□□□□ 0.4
HOXD3-202ENST00000410016 ITIH3Q06033 890 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 GFPT1Q06210 699 aaPredicted RBP17.57■□□□□ 0.4
HOXD3-202ENST00000410016 POTEBQ6S5H4 581 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 SIAH1Q8IUQ4 282 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 CAGE1Q8TC20 777 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 FAM71BQ8TC56 605 aa17.57■□□□□ 0.4
HOXD3-202ENST00000410016 SCFD1Q8WVM8 642 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms