RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ANO1Q5XXA6 986 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 DCAF15Q66K64 600 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 DDX53Q86TM3 631 aaKnown RBP6.16□□□□□ -1.42
LSM5-205ENST00000409952 AMOTL1Q8IY63 956 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 BTN2A2Q8WVV5 523 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 RCC1LQ96I51 464 aaKnown RBP6.16□□□□□ -1.42
LSM5-205ENST00000409952 CCDC74BQ96LY2 380 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 KRTAP4-2Q9BYR5 136 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.16□□□□□ -1.42
LSM5-205ENST00000409952 MBNL3Q9NUK0 354 aaKnown RBP6.16□□□□□ -1.42
LSM5-205ENST00000409952 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 ADAMTS6Q9UKP5 1117 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 ZBTB21Q9ULJ3 1066 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 ZNF891A8MT65 544 aaPredicted RBP6.15□□□□□ -1.42
LSM5-205ENST00000409952 FZD9O00144 591 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 FKBP9O95302 570 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 MT-CO1P00395 513 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 SRFP11831 508 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 LPOP22079 712 aaPredicted RBP6.15□□□□□ -1.42
LSM5-205ENST00000409952 GBP1P32455 592 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 TNK2Q07912 1038 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 MAPRE1Q15691 268 aaKnown RBP6.15□□□□□ -1.42
LSM5-205ENST00000409952 NTRK3Q16288 839 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 ZNF792Q3KQV3 632 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 ARHGAP29Q52LW3 1261 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 TOGARAM2Q6ZUX3 1019 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 FKBP9P1Q75LS8 142 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 EPM2AIP1Q7L775 607 aaPredicted RBP6.15□□□□□ -1.42
LSM5-205ENST00000409952 SMAP1Q8IYB5 467 aaPredicted RBP6.15□□□□□ -1.42
LSM5-205ENST00000409952 SMC1BQ8NDV3 1235 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 CCDC140Q96MF4 163 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 HSPA12BQ96MM6 686 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 AIFM3Q96NN9 605 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 FMNL2Q96PY5 1086 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 MAP3K20Q9NYL2 800 aaKnown RBP6.15□□□□□ -1.42
LSM5-205ENST00000409952 SAMD15Q9P1V8 674 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 AKT3Q9Y243 479 aa6.15□□□□□ -1.42
LSM5-205ENST00000409952 CBX4O00257 560 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 ULK1O75385 1050 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 CRTAMO95727 393 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 LTFP02788 710 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 RNASE1P07998 156 aaKnown RBP6.14□□□□□ -1.43
LSM5-205ENST00000409952 MYL3P08590 195 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 COL6A1P12109 1028 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 NAT1P18440 290 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 VCAM1P19320 739 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 SERPINB3P29508 390 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 MAN1A1P33908 653 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 LSSP48449 732 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 TRAPPC10P48553 1259 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 GFRA1P56159 465 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 KRT85P78386 507 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 DSG1Q02413 1049 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 KLF1Q13351 362 aaPredicted RBP6.14□□□□□ -1.43
LSM5-205ENST00000409952 PLCL1Q15111 1095 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 ATP13A4Q4VNC1 1196 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 GPR158Q5T848 1215 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 ANGEL2Q5VTE6 544 aaKnown RBP6.14□□□□□ -1.43
LSM5-205ENST00000409952 SLC23A3Q6PIS1 610 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 KRBA2Q6ZNG9 492 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 IFNL2Q8IZJ0 200 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 ANKRD42Q8N9B4 389 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 RNF141Q8WVD5 230 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 GJA10Q969M2 543 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 NUP88Q99567 741 aaPredicted RBP6.14□□□□□ -1.43
LSM5-205ENST00000409952 GPR62Q9BZJ7 368 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 DUSP15Q9H1R2 295 aaPredicted RBP6.14□□□□□ -1.43
LSM5-205ENST00000409952 PLCB1Q9NQ66 1216 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 ANLNQ9NQW6 1124 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 DDX21Q9NR30 783 aaKnown RBP eCLIP6.14□□□□□ -1.43
LSM5-205ENST00000409952 MAN1C1Q9NR34 630 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 ZNF69Q9UC07 566 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 ZNF451Q9Y4E5 1061 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 RPS6KL1Q9Y6S9 549 aa6.14□□□□□ -1.43
LSM5-205ENST00000409952 FRMPD2Q68DX3 1309 aaPredicted RBP6.14□□□□□ -1.43
LSM5-205ENST00000409952 FAM155AB1AL88 458 aaPredicted RBP6.13□□□□□ -1.43
LSM5-205ENST00000409952 AQP7O14520 342 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 GAS7O60861 476 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 HSP90AA1P07900 732 aaKnown RBP6.13□□□□□ -1.43
LSM5-205ENST00000409952 ITGA4P13612 1032 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 CD247P20963 164 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 GJA9P57773 515 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 OCRLQ01968 901 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 PCBP2Q15366 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
LSM5-205ENST00000409952 GAB4Q2WGN9 574 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 HDGFL2Q7Z4V5 671 aaPredicted RBP6.13□□□□□ -1.43
LSM5-205ENST00000409952 PNMA8AQ86V59 439 aaPredicted RBP6.13□□□□□ -1.43
LSM5-205ENST00000409952 CPXCR1Q8N123 301 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 NXPE1Q8N323 547 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 ARHGEF39Q8N4T4 335 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 TEX19Q8NA77 164 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 DTWD2Q8NBA8 298 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 BAHD1Q8TBE0 780 aaPredicted RBP6.13□□□□□ -1.43
LSM5-205ENST00000409952 RUNDC1Q96C34 613 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 AHCYL2Q96HN2 611 aaKnown RBP6.13□□□□□ -1.43
LSM5-205ENST00000409952 HERPUD2Q9BSE4 406 aa6.13□□□□□ -1.43
LSM5-205ENST00000409952 MKRN2Q9H000 416 aaKnown RBP6.13□□□□□ -1.43
LSM5-205ENST00000409952 TMX4Q9H1E5 349 aaPredicted RBP6.13□□□□□ -1.43
LSM5-205ENST00000409952 ATP13A1Q9HD20 1204 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms