RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 RTEL1Q9NZ71 1219 aa20.65■□□□□ 0.9
PAX3-208ENST00000409828 SYNRGQ9UMZ2 1314 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 IGLV3-22A0A075B6J6 115 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 CCDC85CA6NKD9 419 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 EDIL3O43854 480 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 ARIH2O95376 493 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 GH1P01241 217 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 TFRCP02786 760 aaKnown RBP20.64■□□□□ 0.89
PAX3-208ENST00000409828 GCFC2P16383 781 aaKnown RBP20.64■□□□□ 0.89
PAX3-208ENST00000409828 ZNF76P36508 570 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 MTMR1Q13613 665 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 NEDD9Q14511 834 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 PPP4R3AQ6IN85 833 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 NEK8Q86SG6 692 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 RNF180Q86T96 592 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 KLHDC9Q8NEP7 349 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 AP5M1Q9H0R1 490 aa20.64■□□□□ 0.89
PAX3-208ENST00000409828 FAM86B1E9PN63 330 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 H3BQV1 296 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 DNM1LO00429 736 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 HSP90AA1P07900 732 aaKnown RBP20.63■□□□□ 0.89
PAX3-208ENST00000409828 FAM86B2P0C5J1 330 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 GUCY1B3Q02153 619 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 SEMA3FQ13275 785 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 LAMC2Q13753 1193 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 IFFO2Q5TF58 517 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 PIK3AP1Q6ZUJ8 805 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 TLK2Q86UE8 772 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 TSEN34Q9BSV6 310 aaKnown RBP20.63■□□□□ 0.89
PAX3-208ENST00000409828 KCNH7Q9NS40 1196 aa20.63■□□□□ 0.89
PAX3-208ENST00000409828 NFASCO94856 1347 aa20.62■□□□□ 0.89
PAX3-208ENST00000409828 POTEFA5A3E0 1075 aa20.62■□□□□ 0.89
PAX3-208ENST00000409828 UBA1P22314 1058 aaKnown RBP20.62■□□□□ 0.89
PAX3-208ENST00000409828 TRAPPC10P48553 1259 aa20.62■□□□□ 0.89
PAX3-208ENST00000409828 INF2Q27J81 1249 aa20.62■□□□□ 0.89
PAX3-208ENST00000409828 Q4G0T1 1027 aa20.62■□□□□ 0.89
PAX3-208ENST00000409828 BRDTQ58F21 947 aaPredicted RBP20.62■□□□□ 0.89
PAX3-208ENST00000409828 CELF3Q5SZQ8 465 aaKnown RBP20.62■□□□□ 0.89
PAX3-208ENST00000409828 MYSM1Q5VVJ2 828 aa20.62■□□□□ 0.89
PAX3-208ENST00000409828 NOSTRINQ8IVI9 506 aa20.62■□□□□ 0.89
PAX3-208ENST00000409828 PCSK9Q8NBP7 692 aaKnown RBP20.62■□□□□ 0.89
PAX3-208ENST00000409828 CYP2W1Q8TAV3 490 aa20.62■□□□□ 0.89
PAX3-208ENST00000409828 A6NJR5 290 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 CTAGE5O15320 804 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 DYNC1LI2O43237 492 aaPredicted RBP20.61■□□□□ 0.89
PAX3-208ENST00000409828 KCNA2P16389 499 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 CPT1AP50416 773 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 FOSBP53539 338 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 SP2Q02086 613 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 ARHGAP1Q07960 439 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 ORC2Q13416 577 aaPredicted RBP20.61■□□□□ 0.89
PAX3-208ENST00000409828 LRRC41Q15345 812 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 LY6KQ17RY6 165 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 EARS2Q5JPH6 523 aaKnown RBP20.61■□□□□ 0.89
PAX3-208ENST00000409828 ANO1Q5XXA6 986 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 CCSAPQ6IQ19 270 aaPredicted RBP20.61■□□□□ 0.89
PAX3-208ENST00000409828 METTL7BQ6UX53 244 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 PLA2G4DQ86XP0 818 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 LENG9Q96B70 501 aa20.61■□□□□ 0.89
PAX3-208ENST00000409828 ZFP91Q96JP5 570 aaPredicted RBP20.61■□□□□ 0.89
PAX3-208ENST00000409828 DOCK5Q9H7D0 1870 aa20.6■□□□□ 0.89
PAX3-208ENST00000409828 MOXD2PA6NHM9 499 aa20.6■□□□□ 0.89
PAX3-208ENST00000409828 KPNA6O60684 536 aa20.6■□□□□ 0.89
PAX3-208ENST00000409828 PGK1P00558 417 aa20.6■□□□□ 0.89
PAX3-208ENST00000409828 C6orf222P0C671 652 aaPredicted RBP20.6■□□□□ 0.89
PAX3-208ENST00000409828 SYT1P21579 422 aa20.6■□□□□ 0.89
PAX3-208ENST00000409828 GNL2Q13823 731 aaKnown RBP20.6■□□□□ 0.89
PAX3-208ENST00000409828 FSCN1Q16658 493 aaKnown RBP20.6■□□□□ 0.89
PAX3-208ENST00000409828 TMEM63BQ5T3F8 832 aa20.6■□□□□ 0.89
PAX3-208ENST00000409828 DHX37Q8IY37 1157 aaKnown RBP20.6■□□□□ 0.89
PAX3-208ENST00000409828 OR6J1Q8NGC5 347 aa20.6■□□□□ 0.89
PAX3-208ENST00000409828 LENG1Q96BZ8 264 aaPredicted RBP20.6■□□□□ 0.89
PAX3-208ENST00000409828 AGO4Q9HCK5 861 aaKnown RBP20.6■□□□□ 0.89
PAX3-208ENST00000409828 ZEB2O60315 1214 aa20.59■□□□□ 0.89
PAX3-208ENST00000409828 GGPS1O95749 300 aa20.59■□□□□ 0.89
PAX3-208ENST00000409828 ARP10275 920 aa20.59■□□□□ 0.89
PAX3-208ENST00000409828 HOXD8P13378 290 aaPredicted RBP20.59■□□□□ 0.89
PAX3-208ENST00000409828 EN2P19622 333 aaPredicted RBP20.59■□□□□ 0.89
PAX3-208ENST00000409828 MNX1P50219 401 aaPredicted RBP20.59■□□□□ 0.89
PAX3-208ENST00000409828 PRR16Q569H4 304 aa20.59■□□□□ 0.89
PAX3-208ENST00000409828 UBE2Q1Q7Z7E8 422 aa20.59■□□□□ 0.89
PAX3-208ENST00000409828 PPTC7Q8NI37 304 aa20.59■□□□□ 0.89
PAX3-208ENST00000409828 TBC1D22BQ9NU19 505 aa20.59■□□□□ 0.89
PAX3-208ENST00000409828 KBTBD13C9JR72 458 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 TBX3O15119 743 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 ATP9AO75110 1047 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 PPFIA4O75335 1185 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 FARP2O94887 1054 aaPredicted RBP20.58■□□□□ 0.89
PAX3-208ENST00000409828 COL6A1P12109 1028 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 LETM2Q2VYF4 491 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 GNASQ5JWF2 1037 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 GJC2Q5T442 439 aaPredicted RBP20.58■□□□□ 0.89
PAX3-208ENST00000409828 COPS5Q92905 334 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 MLXIPQ9HAP2 919 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 DDX25Q9UHL0 483 aaKnown RBP20.58■□□□□ 0.89
PAX3-208ENST00000409828 NOL7Q9UMY1 257 aaKnown RBP20.58■□□□□ 0.89
PAX3-208ENST00000409828 PHF24Q9UPV7 400 aa20.58■□□□□ 0.89
PAX3-208ENST00000409828 KIF28PB7ZC32 967 aa20.57■□□□□ 0.88
PAX3-208ENST00000409828 IPO5O00410 1097 aaKnown RBP20.57■□□□□ 0.88
PAX3-208ENST00000409828 CABYRO75952 493 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms