RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 HOXD8P13378 290 aaPredicted RBP16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 ICAM3P32942 547 aa16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 NEDD9Q14511 834 aa16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 FAM47CQ5HY64 1035 aa16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 CELF3Q5SZQ8 465 aaKnown RBP16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 ERICH6BQ5W0A0 696 aa16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 SRBD1Q8N5C6 995 aaKnown RBP16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 CCDC155Q8N6L0 562 aa16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 GIMAP8Q8ND71 665 aaPredicted RBP16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 HERVK_113Q902F9 699 aa16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 SEMA6BQ9H3T3 888 aa16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 PSTPIP2Q9H939 334 aa16.75■□□□□ 0.27
NIF3L1-205ENST00000409588 FRMPD4Q14CM0 1322 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 MAFGO15525 162 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 RGS20O76081 388 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 REC8O95072 547 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 ZNF365Q70YC5 407 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 Q7L0L9 218 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 CAGE1Q8TC20 777 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 KCNB2Q92953 911 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 CDHR1Q96JP9 859 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 INPP4AQ96PE3 977 aaPredicted RBP16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 SENP7Q9BQF6 1050 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 MYL10Q9BUA6 226 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 GLT8D2Q9H1C3 349 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 TRMT13Q9NUP7 481 aaKnown RBP16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 NOD1Q9Y239 953 aa16.74■□□□□ 0.27
NIF3L1-205ENST00000409588 CCDC196A0A1B0GTZ2 297 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 SPATA31C2B4DYI2 1134 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 MEIS2O14770 477 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 PCNX4Q63HM2 1172 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 APOA5Q6Q788 366 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 NLRX1Q86UT6 975 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 FBXL16Q8N461 479 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 ZNF713Q8N859 430 aaPredicted RBP16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 C7orf31Q8N865 590 aa16.73■□□□□ 0.27
NIF3L1-205ENST00000409588 KIAA1217Q5T5P2 1943 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 SCN10AQ9Y5Y9 1956 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 ZBTB43O43298 467 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 FIBPO43427 364 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 ACTN1P12814 892 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 TIE1P35590 1138 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 PTGISQ16647 500 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 PIBF1Q8WXW3 757 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 KAT2BQ92831 832 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 SPATA33Q96N06 139 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 USP26Q9BXU7 913 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 EHMT1Q9H9B1 1298 aa16.72■□□□□ 0.27
NIF3L1-205ENST00000409588 BAZ2BQ9UIF8 2168 aaKnown RBP16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 HAS3O00219 553 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 GGPS1O95749 300 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 F2P00734 622 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 ACRP10323 421 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 PSMA5P28066 241 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 HSPA4P34932 840 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 CCL23P55773 120 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 MRPS9P82933 396 aaKnown RBP16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 FGD1P98174 961 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 MICU3Q86XE3 530 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 WNT8AQ9H1J5 351 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 GTF2IRD1Q9UHL9 959 aa16.71■□□□□ 0.27
NIF3L1-205ENST00000409588 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 FOSP01100 380 aaPredicted RBP16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 IQCF3P0C7M6 154 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 CYP2C9P11712 490 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 UBA1P22314 1058 aaKnown RBP16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 PSEN2P49810 448 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 SP2Q02086 613 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 MFSD10Q14728 455 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 RAB30Q15771 203 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 RTN1Q16799 776 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 KIAA0753Q2KHM9 967 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 USP17L6PQ6QN14 398 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 METTL7BQ6UX53 244 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 PLCD3Q8N3E9 789 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 GPRASP2Q96D09 838 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 LRRC2Q9BYS8 371 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 MSRAQ9UJ68 235 aa16.7■□□□□ 0.26
NIF3L1-205ENST00000409588 NOP56O00567 594 aaKnown RBP16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 DNAJB2P25686 324 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 RBL2Q08999 1139 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 PTK7Q13308 1070 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 HSDL1Q3SXM5 330 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 MCTP2Q6DN12 878 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 CCDC82Q8N4S0 544 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 SLC17A8Q8NDX2 589 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 IL31RAQ8NI17 732 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 PHOSPHO2Q8TCD6 241 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 TIFAQ96CG3 184 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 GUCD1Q96NT3 240 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 SLC4A7Q9Y6M7 1214 aa16.69■□□□□ 0.26
NIF3L1-205ENST00000409588 UMODL1Q5DID0 1318 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms