RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SH3BP5LQ7L8J4 393 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 GLIS3Q8NEA6 775 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 CCDC42Q96M95 316 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 ARFGEF1Q9Y6D6 1849 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 CYP3A7-CYP3A51PA0A087WV96 503 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
NUP50-203ENST00000407019 CYP3A7P24462 503 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 FAM193AP78312 1265 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 SPA17Q15506 151 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 NCAPH2Q6IBW4 605 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 TATDN1Q6P1N9 297 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 MOXD1Q6UVY6 613 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 C2CD5Q86YS7 1000 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 HNRNPLLQ8WVV9 542 aaKnown RBP18.69■□□□□ 0.58
NUP50-203ENST00000407019 MBOAT7Q96N66 472 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 FUT8Q9BYC5 575 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 TSGA10Q9BZW7 698 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 MMRN2Q9H8L6 949 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 FAM207AQ9NSI2 230 aaPredicted RBP18.69■□□□□ 0.58
NUP50-203ENST00000407019 PLAGL2Q9UPG8 496 aa18.69■□□□□ 0.58
NUP50-203ENST00000407019 RCCD1A6NED2 376 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 ENC1O14682 589 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 EPHB6O15197 1021 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 KIF20AO95235 890 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 ATP1A1P05023 1023 aaKnown RBP18.68■□□□□ 0.58
NUP50-203ENST00000407019 VAV2P52735 878 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 ZCWPW2Q504Y3 356 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 PAPD7Q5XG87 772 aaKnown RBP18.68■□□□□ 0.58
NUP50-203ENST00000407019 CCDC65Q8IXS2 484 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 PNKPQ96T60 521 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 LACRTQ9GZZ8 138 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 KIAA1024Q9UPX6 916 aa18.68■□□□□ 0.58
NUP50-203ENST00000407019 POTEB3A0JP26 581 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 POTECB2RU33 542 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 E9PMD0 336 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 PLSCR1O15162 318 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 ERLIN1O75477 346 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 PLA2G4BP0C869 781 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 FKBP3Q00688 224 aaKnown RBP18.67■□□□□ 0.58
NUP50-203ENST00000407019 MCTP2Q6DN12 878 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 POTEBQ6S5H4 581 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 SIAH1Q8IUQ4 282 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 SLFN12Q8IYM2 578 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 PURBQ96QR8 312 aaKnown RBP18.67■□□□□ 0.58
NUP50-203ENST00000407019 UBXN6Q9BZV1 441 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 SAR1BQ9Y6B6 198 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 MEIS2O14770 477 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 RHOXF2BP0C7M4 288 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 CYP27A1Q02318 531 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 KIF5AQ12840 1032 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 MSL1Q68DK7 614 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 GPBP1Q86WP2 473 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 GMCL1P1Q8NEA9 526 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 UIMC1Q96RL1 719 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 RHOXF2Q9BQY4 288 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 AMNQ9BXJ7 453 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 HDAC6Q9UBN7 1215 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 SERPINA10Q9UK55 444 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 COL4A3BPQ9Y5P4 624 aa18.67■□□□□ 0.58
NUP50-203ENST00000407019 TUBBP07437 444 aa18.66■□□□□ 0.58
NUP50-203ENST00000407019 ARHGAP4P98171 946 aa18.66■□□□□ 0.58
NUP50-203ENST00000407019 ABCB5Q2M3G0 1257 aa18.66■□□□□ 0.58
NUP50-203ENST00000407019 HAUS3Q68CZ6 603 aa18.66■□□□□ 0.58
NUP50-203ENST00000407019 STYK1Q6J9G0 422 aa18.66■□□□□ 0.58
NUP50-203ENST00000407019 TANGO6Q9C0B7 1094 aa18.66■□□□□ 0.58
NUP50-203ENST00000407019 ARHGAP20Q9P2F6 1191 aa18.66■□□□□ 0.58
NUP50-203ENST00000407019 ANO9A1A5B4 782 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 F5H6K3 240 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 TRAF5O00463 557 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 GDF11O95390 407 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 PLEKP08567 350 aaPredicted RBP18.65■□□□□ 0.58
NUP50-203ENST00000407019 KLRC3Q07444 240 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 CCDC40Q4G0X9 1142 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 NOA1Q8NC60 698 aaKnown RBP18.65■□□□□ 0.58
NUP50-203ENST00000407019 NEK11Q8NG66 645 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 SECISBP2LQ93073 1101 aaKnown RBP18.65■□□□□ 0.58
NUP50-203ENST00000407019 GMCL1Q96IK5 515 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 CEP63Q96MT8 703 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 ZHX1Q9UKY1 873 aaPredicted RBP18.65■□□□□ 0.58
NUP50-203ENST00000407019 H0YIN7 160 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 ZNF263O14978 683 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 USO1O60763 962 aaKnown RBP18.65■□□□□ 0.58
NUP50-203ENST00000407019 APBA3O96018 575 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 CYP11B2P19099 503 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 KIF11P52732 1056 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 SMC1AQ14683 1233 aaKnown RBP18.65■□□□□ 0.58
NUP50-203ENST00000407019 BEND6Q5SZJ8 279 aaPredicted RBP18.65■□□□□ 0.58
NUP50-203ENST00000407019 FBXO11Q86XK2 927 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 CRYGNQ8WXF5 182 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 EDEM3Q9BZQ6 932 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 GBP3Q9H0R5 595 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 DEF6Q9H4E7 631 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 TBC1D7Q9P0N9 293 aa18.65■□□□□ 0.58
NUP50-203ENST00000407019 ZNF646O15015 1829 aaPredicted RBP18.64■□□□□ 0.58
NUP50-203ENST00000407019 LRRC53A6NM62 1247 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 MED24O75448 989 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 NDUFB10O96000 172 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 STAT3P40763 770 aa18.64■□□□□ 0.57
NUP50-203ENST00000407019 CKAP4Q07065 602 aaKnown RBP18.64■□□□□ 0.57
NUP50-203ENST00000407019 IKQ13123 557 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms