RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 PRIMPOLQ96LW4 560 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 SPTLC3Q9NUV7 552 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 A0A1B0GTH6 734 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 BICDL2A1A5D9 508 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 GLTPD2A6NH11 291 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 SETQ01105 290 aaPredicted RBP14.61□□□□□ -0.07
SNU13-203ENST00000401959 ECM1Q16610 540 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 NCAPH2Q6IBW4 605 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 CPXCR1Q8N123 301 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 KCTD17Q8N5Z5 321 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 NOC3LQ8WTT2 800 aaKnown RBP14.61□□□□□ -0.07
SNU13-203ENST00000401959 CLEC4DQ8WXI8 215 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 DCPSQ96C86 337 aaKnown RBP14.61□□□□□ -0.07
SNU13-203ENST00000401959 RAVER2Q9HCJ3 691 aaKnown RBP14.61□□□□□ -0.07
SNU13-203ENST00000401959 BMP2KQ9NSY1 1161 aaPredicted RBP14.61□□□□□ -0.07
SNU13-203ENST00000401959 KIAA1024Q9UPX6 916 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 ZHX2Q9Y6X8 837 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 RLFQ13129 1914 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 WDR90Q96KV7 1748 aa14.61□□□□□ -0.07
SNU13-203ENST00000401959 COL11A1P12107 1806 aaPredicted RBP14.6□□□□□ -0.07
SNU13-203ENST00000401959 ALAS1P13196 640 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 SFPQP23246 707 aaKnown RBP eCLIP14.6□□□□□ -0.07
SNU13-203ENST00000401959 RPA1P27694 616 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 STAT3P40763 770 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 PSMD2Q13200 908 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 DGKZQ13574 1117 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 NR1I3Q14994 352 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 DDX12PQ92771 950 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 INTS13Q9NVM9 706 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 TMOD4Q9NZQ9 345 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 LIMA1Q9UHB6 759 aaKnown RBP14.6□□□□□ -0.07
SNU13-203ENST00000401959 VAV3Q9UKW4 847 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 MAPK8IP1Q9UQF2 711 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 RPTORQ8N122 1335 aa14.6□□□□□ -0.07
SNU13-203ENST00000401959 POTEB3A0JP26 581 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 POTECB2RU33 542 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 MED24O75448 989 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 CCNE1P24864 410 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 ARID5BQ14865 1188 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 CEP55Q53EZ4 464 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 POTEBQ6S5H4 581 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 DYMQ7RTS9 669 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 KRT26Q7Z3Y9 468 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 SULF1Q8IWU6 871 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.59□□□□□ -0.072e-6■■■□□ 16.8
SNU13-203ENST00000401959 CYP2W1Q8TAV3 490 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 SLC5A5Q92911 643 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 P2RX5Q93086 422 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 UIMC1Q96RL1 719 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 POLR3CQ9BUI4 534 aaPredicted RBP14.59□□□□□ -0.07
SNU13-203ENST00000401959 THAP9Q9H5L6 903 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 PAPPA2Q9BXP8 1791 aa14.59□□□□□ -0.07
SNU13-203ENST00000401959 VWA5AO00534 786 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 NFIBO00712 420 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 USP2O75604 605 aaPredicted RBP14.58□□□□□ -0.07
SNU13-203ENST00000401959 PLA2G4BP0C869 781 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 SKILP12757 684 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 OAZ1P54368 228 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 HMGCS2P54868 508 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 CCZ1BP86790 482 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 CCZ1P86791 482 aaPredicted RBP14.58□□□□□ -0.07
SNU13-203ENST00000401959 STK4Q13043 487 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 LRCH2Q5VUJ6 765 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 SPECC1LQ69YQ0 1117 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 NIPA1Q7RTP0 329 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 APTXQ7Z2E3 356 aaKnown RBP14.58□□□□□ -0.07
SNU13-203ENST00000401959 TRIM47Q96LD4 638 aa14.58□□□□□ -0.07
SNU13-203ENST00000401959 ADD3Q9UEY8 706 aaKnown RBP14.58□□□□□ -0.07
SNU13-203ENST00000401959 LOXHD1Q8IVV2 1947 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 OTOFQ9HC10 1997 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 LRRC10BA6NIK2 292 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 KCNJ18B7U540 433 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 E9PMD0 336 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 MEIS1O00470 390 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 PSMD10O75832 226 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 SSBP05455 408 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNU13-203ENST00000401959 FCER1AP12319 257 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 IDEP14735 1019 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 DSG3P32926 999 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 UBXN2AP68543 259 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 MAP3K9P80192 1104 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 PPP2R5CQ13362 524 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 KCNJ12Q14500 433 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 TCP11X2Q5H9J9 407 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 TTI2Q6NXR4 508 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 ARMCX5Q6P1M9 558 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 CATSPER3Q86XQ3 398 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 CCDC65Q8IXS2 484 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 CCDC112Q8NEF3 446 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.08
SNU13-203ENST00000401959 ATG4CQ96DT6 458 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 MXRA8Q9BRK3 442 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 WDR11Q9BZH6 1224 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 TUFT1Q9NNX1 390 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 FZD1Q9UP38 647 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 DNM3Q9UQ16 869 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 AFG3L2Q9Y4W6 797 aa14.58□□□□□ -0.08
SNU13-203ENST00000401959 PTPRFP10586 1907 aa14.57□□□□□ -0.08
SNU13-203ENST00000401959 TRIM49BA6NDI0 452 aa14.57□□□□□ -0.08
SNU13-203ENST00000401959 PPP1R12BO60237 982 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms