RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 RASGRP4Q8TDF6 673 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 TNFRSF25Q93038 417 aa20.13■□□□□ 0.81
CTNS-203ENST00000399306 FOXP1Q9H334 677 aaPredicted RBP20.13■□□□□ 0.81
CTNS-203ENST00000399306 CYP3A7-CYP3A51PA0A087WV96 503 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 CCDC194A0A1B0GVG4 234 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 KBTBD13C9JR72 458 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 ZEB2O60315 1214 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 ARIH2O95376 493 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 PDCP20941 246 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 CYP3A7P24462 503 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 MNX1P50219 401 aaPredicted RBP20.12■□□□□ 0.81
CTNS-203ENST00000399306 CPT1AP50416 773 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 SEMA3FQ13275 785 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 MTMR1Q13613 665 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 LAMC2Q13753 1193 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 CCSAPQ6IQ19 270 aaPredicted RBP20.12■□□□□ 0.81
CTNS-203ENST00000399306 DIS3L2Q8IYB7 885 aaKnown RBP20.12■□□□□ 0.81
CTNS-203ENST00000399306 TBCKQ8TEA7 893 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 PGBD1Q96JS3 809 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 GJB4Q9NTQ9 266 aa20.12■□□□□ 0.81
CTNS-203ENST00000399306 A6NJR5 290 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 CTAGE5O15320 804 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 DYNC1LI2O43237 492 aaPredicted RBP20.11■□□□□ 0.81
CTNS-203ENST00000399306 KPNA6O60684 536 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 FARP2O94887 1054 aaPredicted RBP20.11■□□□□ 0.81
CTNS-203ENST00000399306 COL6A1P12109 1028 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 PDIA4P13667 645 aaKnown RBP20.11■□□□□ 0.81
CTNS-203ENST00000399306 GCFC2P16383 781 aaKnown RBP20.11■□□□□ 0.81
CTNS-203ENST00000399306 ZNF76P36508 570 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 ANO1Q5XXA6 986 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 OR6J1Q8NGC5 347 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 RTEL1Q9NZ71 1219 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 PHF24Q9UPV7 400 aa20.11■□□□□ 0.81
CTNS-203ENST00000399306 NFASCO94856 1347 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 IGLV3-22A0A075B6J6 115 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 DTNBO60941 627 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 CABYRO75952 493 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 PGK1P00558 417 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 C6orf222P0C671 652 aaPredicted RBP20.1■□□□□ 0.81
CTNS-203ENST00000399306 UBA1P22314 1058 aaKnown RBP20.1■□□□□ 0.81
CTNS-203ENST00000399306 ARHGAP1Q07960 439 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 FSCN1Q16658 493 aaKnown RBP20.1■□□□□ 0.81
CTNS-203ENST00000399306 LY6KQ17RY6 165 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 CELF3Q5SZQ8 465 aaKnown RBP20.1■□□□□ 0.81
CTNS-203ENST00000399306 MYSM1Q5VVJ2 828 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 METTL7BQ6UX53 244 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 NECAB2Q7Z6G3 386 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 OXER1Q8TDS5 423 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 LENG1Q96BZ8 264 aaPredicted RBP20.1■□□□□ 0.81
CTNS-203ENST00000399306 MBOAT7Q96N66 472 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 SEZ6LQ9BYH1 1024 aa20.1■□□□□ 0.81
CTNS-203ENST00000399306 BTBD18B2RXH4 712 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 HOXD8P13378 290 aaPredicted RBP20.09■□□□□ 0.81
CTNS-203ENST00000399306 KCNA2P16389 499 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 U2AF2P26368 475 aaKnown RBP eCLIP20.09■□□□□ 0.81
CTNS-203ENST00000399306 Q4G0T1 1027 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 GNASQ5JWF2 1037 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 PPP4R3AQ6IN85 833 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 NEK8Q86SG6 692 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 DHX37Q8IY37 1157 aaKnown RBP20.09■□□□□ 0.81
CTNS-203ENST00000399306 PPTC7Q8NI37 304 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 KCNH7Q9NS40 1196 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 POLR3EQ9NVU0 708 aa20.09■□□□□ 0.81
CTNS-203ENST00000399306 FAM86B1E9PN63 330 aa20.08■□□□□ 0.81
CTNS-203ENST00000399306 EDIL3O43854 480 aa20.08■□□□□ 0.81
CTNS-203ENST00000399306 GGPS1O95749 300 aa20.08■□□□□ 0.81
CTNS-203ENST00000399306 FAM86B2P0C5J1 330 aa20.08■□□□□ 0.81
CTNS-203ENST00000399306 SP2Q02086 613 aa20.08■□□□□ 0.81
CTNS-203ENST00000399306 NR5A1Q13285 461 aa20.08■□□□□ 0.81
CTNS-203ENST00000399306 GJC2Q5T442 439 aaPredicted RBP20.08■□□□□ 0.81
CTNS-203ENST00000399306 PLA2G4DQ86XP0 818 aa20.08■□□□□ 0.81
CTNS-203ENST00000399306 C11orf49Q9H6J7 331 aa20.08■□□□□ 0.81
CTNS-203ENST00000399306 ELP1O95163 1332 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 ACLYP53396 1101 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 ORC2Q13416 577 aaPredicted RBP20.07■□□□□ 0.8
CTNS-203ENST00000399306 KCNA10Q16322 511 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 INF2Q27J81 1249 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 TMEM63BQ5T3F8 832 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 C1orf53Q5VUE5 145 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 LARP1BQ659C4 914 aaKnown RBP20.07■□□□□ 0.8
CTNS-203ENST00000399306 PIK3AP1Q6ZUJ8 805 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 COPS5Q92905 334 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 LENG9Q96B70 501 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 MLXIPQ9HAP2 919 aa20.07■□□□□ 0.8
CTNS-203ENST00000399306 AGO4Q9HCK5 861 aaKnown RBP20.07■□□□□ 0.8
CTNS-203ENST00000399306 H3BQV1 296 aa20.06■□□□□ 0.8
CTNS-203ENST00000399306 PPFIA4O75335 1185 aa20.06■□□□□ 0.8
CTNS-203ENST00000399306 TRAPPC10P48553 1259 aa20.06■□□□□ 0.8
CTNS-203ENST00000399306 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
CTNS-203ENST00000399306 IFFO2Q5TF58 517 aa20.06■□□□□ 0.8
CTNS-203ENST00000399306 NOSTRINQ8IVI9 506 aa20.06■□□□□ 0.8
CTNS-203ENST00000399306 CYP2W1Q8TAV3 490 aa20.06■□□□□ 0.8
CTNS-203ENST00000399306 PAWRQ96IZ0 340 aaKnown RBP20.06■□□□□ 0.8
CTNS-203ENST00000399306 ZFP91Q96JP5 570 aaPredicted RBP20.06■□□□□ 0.8
CTNS-203ENST00000399306 TBC1D22BQ9NU19 505 aa20.06■□□□□ 0.8
CTNS-203ENST00000399306 SCN10AQ9Y5Y9 1956 aa20.05■□□□□ 0.8
CTNS-203ENST00000399306 MYADML2A6NDP7 307 aa20.05■□□□□ 0.8
CTNS-203ENST00000399306 TBX3O15119 743 aa20.05■□□□□ 0.8
CTNS-203ENST00000399306 ATP9AO75110 1047 aa20.05■□□□□ 0.8
CTNS-203ENST00000399306 ASGR1P07306 291 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms