RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 POLR2MP0CAP2 368 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 AKR1A1P14550 325 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 ADCYAP1R1P41586 468 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 RBM25P49756 843 aaKnown RBP9.62□□□□□ -0.87
BRCC3-205ENST00000399026 PDE4DQ08499 809 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 ACVR2BQ13705 512 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 NTRK3Q16288 839 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 CCDC144BQ3MJ40 725 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 KMT5BQ4FZB7 885 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 TMEM63BQ5T3F8 832 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 USP17L6PQ6QN14 398 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 NECAB1Q8N987 351 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 RGS22Q8NE09 1264 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 SMARCC2Q8TAQ2 1214 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 ZNF274Q96GC6 653 aaPredicted RBP9.62□□□□□ -0.87
BRCC3-205ENST00000399026 PGBD1Q96JS3 809 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 RMDN3Q96TC7 470 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 SLKQ9H2G2 1235 aaPredicted RBP9.62□□□□□ -0.87
BRCC3-205ENST00000399026 PXMP2Q9NR77 195 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 PDGFCQ9NRA1 345 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 NRBP1Q9UHY1 535 aa9.62□□□□□ -0.87
BRCC3-205ENST00000399026 SYNRGQ9UMZ2 1314 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 MYADML2A6NDP7 307 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 PFKFB2O60825 505 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 PGK1P00558 417 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 RARBP10826 455 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 SCG2P13521 617 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 EDNRBP24530 442 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 GHRHRQ02643 423 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 ST3GAL1Q11201 340 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 TRAF1Q13077 416 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 ANKRD1Q15327 319 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 PKN1Q16512 942 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 ME3Q16798 604 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 PFKFB3Q16875 520 aaPredicted RBP9.61□□□□□ -0.87
BRCC3-205ENST00000399026 GJC2Q5T442 439 aaPredicted RBP9.61□□□□□ -0.87
BRCC3-205ENST00000399026 ARHGEF16Q5VV41 709 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 DNERQ8NFT8 737 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 MORC4Q8TE76 937 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 CUL5Q93034 780 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 TBC1D32Q96NH3 1257 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 BACH2Q9BYV9 841 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 ALDH8A1Q9H2A2 487 aaPredicted RBP9.61□□□□□ -0.87
BRCC3-205ENST00000399026 ABHD16BQ9H3Z7 469 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 XPNPEP3Q9NQH7 507 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 OGDHLQ9ULD0 1010 aa9.61□□□□□ -0.87
BRCC3-205ENST00000399026 MEIS2O14770 477 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 ADAMTS3O15072 1205 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 PRPF3O43395 683 aaKnown RBP9.6□□□□□ -0.87
BRCC3-205ENST00000399026 MSCO60682 206 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 MYCLP12524 364 aaPredicted RBP9.6□□□□□ -0.87
BRCC3-205ENST00000399026 IFNAR1P17181 557 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 SMPD1P17405 629 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 ADCY7P51828 1080 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 AKAP17AQ02040 695 aaKnown RBP9.6□□□□□ -0.87
BRCC3-205ENST00000399026 PGM5Q15124 567 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 PPP2R5BQ15173 497 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 TAPT1Q6NXT6 567 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 SEPT14Q6ZU15 432 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 NSUN6Q8TEA1 469 aaKnown RBP9.6□□□□□ -0.87
BRCC3-205ENST00000399026 GTF3C6Q969F1 213 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 PAWRQ96IZ0 340 aaKnown RBP9.6□□□□□ -0.87
BRCC3-205ENST00000399026 AIFM3Q96NN9 605 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 MPHOSPH6Q99547 160 aaKnown RBP9.6□□□□□ -0.87
BRCC3-205ENST00000399026 PDCD2LQ9BRP1 358 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 RNF26Q9BY78 433 aaPredicted RBP9.6□□□□□ -0.87
BRCC3-205ENST00000399026 PSTPIP2Q9H939 334 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 VTA1Q9NP79 307 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 TMEM260Q9NX78 707 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 BARHL2Q9NY43 387 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 VPS54Q9P1Q0 977 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 FAM184BQ9ULE4 1060 aa9.6□□□□□ -0.87
BRCC3-205ENST00000399026 FRMPD4Q14CM0 1322 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 hCG_1984214I3L0E3 225 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 SORBS3O60504 671 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 ADAMTS4O75173 837 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 ARIH2O95376 493 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
BRCC3-205ENST00000399026 CTDNEP1O95476 244 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 NR3C2P08235 984 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 TNFAIP2Q03169 654 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 SSRP1Q08945 709 aaKnown RBP9.59□□□□□ -0.87
BRCC3-205ENST00000399026 RABEP1Q15276 862 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 LRRC41Q15345 812 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 UBE2Q1Q7Z7E8 422 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 TLK2Q86UE8 772 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 CCDC83Q8IWF9 413 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 TRIM22Q8IYM9 498 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 ZNF713Q8N859 430 aaPredicted RBP9.59□□□□□ -0.87
BRCC3-205ENST00000399026 RASGRP4Q8TDF6 673 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 NLRP7Q8WX94 980 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 COPS5Q92905 334 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 RIC8AQ9NPQ8 531 aa9.59□□□□□ -0.87
BRCC3-205ENST00000399026 STK36Q9NRP7 1315 aa9.58□□□□□ -0.88
BRCC3-205ENST00000399026 MYH7BA7E2Y1 1941 aa9.58□□□□□ -0.88
BRCC3-205ENST00000399026 LOC102724159A0A0B4J2E5 919 aa9.58□□□□□ -0.88
BRCC3-205ENST00000399026 SMCO2A6NFE2 343 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms