RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 TMEM199Q8N511 208 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 PPTC7Q8NI37 304 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 INPP4AQ96PE3 977 aaPredicted RBP20.07■□□□□ 0.8
UPK3A-202ENST00000396082 HIPK3Q9H422 1215 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 BARHL2Q9NY43 387 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 PCDHA6Q9UN73 950 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 PCDHA8Q9Y5H6 950 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 SMCO2A6NFE2 343 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 SOX1O00570 391 aaPredicted RBP20.06■□□□□ 0.8
UPK3A-202ENST00000396082 SCG2P13521 617 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 TOB2Q14106 344 aaPredicted RBP20.06■□□□□ 0.8
UPK3A-202ENST00000396082 NEDD9Q14511 834 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 SHHQ15465 462 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 PFKFB3Q16875 520 aaPredicted RBP20.06■□□□□ 0.8
UPK3A-202ENST00000396082 LRIT3Q3SXY7 679 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 MFSD5Q6N075 450 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 TYW1BQ6NUM6 668 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 PPP1R13LQ8WUF5 828 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 LRCH3Q96II8 777 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 KATNAL1Q9BW62 490 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 GLT8D2Q9H1C3 349 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 RIC8AQ9NPQ8 531 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 PDRG1Q9NUG6 133 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 TRMT13Q9NUP7 481 aaKnown RBP20.06■□□□□ 0.8
UPK3A-202ENST00000396082 NOD1Q9Y239 953 aa20.06■□□□□ 0.8
UPK3A-202ENST00000396082 NOP56O00567 594 aaKnown RBP20.05■□□□□ 0.8
UPK3A-202ENST00000396082 ZNF286BP0CG31 522 aa20.05■□□□□ 0.8
UPK3A-202ENST00000396082 PDIA3P30101 505 aaKnown RBP20.05■□□□□ 0.8
UPK3A-202ENST00000396082 ICAM3P32942 547 aa20.05■□□□□ 0.8
UPK3A-202ENST00000396082 SP2Q02086 613 aa20.05■□□□□ 0.8
UPK3A-202ENST00000396082 PTPN11Q06124 597 aaPredicted RBP20.05■□□□□ 0.8
UPK3A-202ENST00000396082 PPIGQ13427 754 aaKnown RBP eCLIP20.05■□□□□ 0.8
UPK3A-202ENST00000396082 C9orf50Q5SZB4 431 aa20.05■□□□□ 0.8
UPK3A-202ENST00000396082 CCDC12Q8WUD4 166 aaPredicted RBP20.05■□□□□ 0.8
UPK3A-202ENST00000396082 PHKBQ93100 1093 aa20.05■□□□□ 0.8
UPK3A-202ENST00000396082 SPATA31C2B4DYI2 1134 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 PRPF3O43395 683 aaKnown RBP20.04■□□□□ 0.8
UPK3A-202ENST00000396082 CYP2C18P33260 490 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 EVCP57679 992 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 HSDL1Q3SXM5 330 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 TEX2Q8IWB9 1127 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 CDHR1Q96JP9 859 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 PGBD1Q96JS3 809 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 ALG1Q9BT22 464 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 SLC26A6Q9BXS9 759 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 NCOA5Q9HCD5 579 aaKnown RBP20.04■□□□□ 0.8
UPK3A-202ENST00000396082 DOCK5Q9H7D0 1870 aa20.04■□□□□ 0.8
UPK3A-202ENST00000396082 CPLX1O14810 134 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 PPFIA3O75145 1194 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 PPFIA4O75335 1185 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 FOSP01100 380 aaPredicted RBP20.03■□□□□ 0.8
UPK3A-202ENST00000396082 CYP2C9P11712 490 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 PSEN2P49810 448 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 ANAPC15P60006 121 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 MFSD10Q14728 455 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 CYFIP1Q7L576 1253 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 C7orf31Q8N865 590 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 GPRASP2Q96D09 838 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 RNPC3Q96LT9 517 aaKnown RBP20.03■□□□□ 0.8
UPK3A-202ENST00000396082 LARP6Q9BRS8 491 aaKnown RBP20.03■□□□□ 0.8
UPK3A-202ENST00000396082 NOC4LQ9BVI4 516 aaKnown RBP20.03■□□□□ 0.8
UPK3A-202ENST00000396082 RNF26Q9BY78 433 aaPredicted RBP20.03■□□□□ 0.8
UPK3A-202ENST00000396082 ANO3Q9BYT9 981 aa20.03■□□□□ 0.8
UPK3A-202ENST00000396082 RANBP2P49792 3224 aaKnown RBP20.02■□□□□ 0.8
UPK3A-202ENST00000396082 F2P00734 622 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 CSF2RAP15509 400 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 IFNAR1P17181 557 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 EPHB4P54760 987 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 CCL23P55773 120 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 SP4Q02446 784 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 STK3Q13188 491 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 SEMA3FQ13275 785 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 AP3B2Q13367 1082 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 MTMR1Q13613 665 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 KIAA0753Q2KHM9 967 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 CPLX2Q6PUV4 134 aaKnown RBP20.02■□□□□ 0.8
UPK3A-202ENST00000396082 METTL7BQ6UX53 244 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 TRIM22Q8IYM9 498 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 GIMAP8Q8ND71 665 aaPredicted RBP20.02■□□□□ 0.8
UPK3A-202ENST00000396082 KAT2BQ92831 832 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 ZNF274Q96GC6 653 aaPredicted RBP20.02■□□□□ 0.8
UPK3A-202ENST00000396082 C6orf50Q9HD87 102 aa20.02■□□□□ 0.8
UPK3A-202ENST00000396082 UMODL1Q5DID0 1318 aa20.02■□□□□ 0.79
UPK3A-202ENST00000396082 NTRK3Q16288 839 aa20.01■□□□□ 0.79
UPK3A-202ENST00000396082 CCDC148Q8NFR7 591 aa20.01■□□□□ 0.79
UPK3A-202ENST00000396082 SENP7Q9BQF6 1050 aa20.01■□□□□ 0.79
UPK3A-202ENST00000396082 TMEM260Q9NX78 707 aa20.01■□□□□ 0.79
UPK3A-202ENST00000396082 PKD2L1Q9P0L9 805 aa20.01■□□□□ 0.79
UPK3A-202ENST00000396082 ESYT2A0FGR8 921 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 ACRP10323 421 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 HOXD8P13378 290 aaPredicted RBP20■□□□□ 0.79
UPK3A-202ENST00000396082 ITGB5P18084 799 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 GNA11P29992 359 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 SSRP1Q08945 709 aaKnown RBP20■□□□□ 0.79
UPK3A-202ENST00000396082 PKN1Q16512 942 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 PTGISQ16647 500 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 JAKMIP3Q5VZ66 844 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 PSRC1Q6PGN9 363 aaPredicted RBP20■□□□□ 0.79
UPK3A-202ENST00000396082 SESTD1Q86VW0 696 aa20■□□□□ 0.79
UPK3A-202ENST00000396082 BCAS3Q9H6U6 928 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms