RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 TMEM253P0C7T8 217 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 ERCC5P28715 1186 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 S100A5P33763 92 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 USP5P45974 858 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 IDH3AP50213 366 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 FAM160A1Q05DH4 1040 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 ADCY1Q08828 1119 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 RIPPLY1Q0D2K3 151 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 COX10Q12887 443 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 STIM1Q13586 685 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 SAFB2Q14151 953 aaKnown RBP eCLIP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 RCN1Q15293 331 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 NFE2L2Q16236 605 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 INF2Q27J81 1249 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 ZXDCQ2QGD7 858 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 CMPK2Q5EBM0 449 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 SFMBT2Q5VUG0 894 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 PHLDB2Q86SQ0 1253 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 TMEM110Q86TL2 294 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 CRACR2BQ8N4Y2 399 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 FBXO15Q8NCQ5 510 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 NEK11Q8NG66 645 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 CAGE1Q8TC20 777 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 ACMSDQ8TDX5 336 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 IFT81Q8WYA0 676 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 ZKSCAN4Q969J2 545 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 GCC1Q96CN9 775 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 OPTNQ96CV9 577 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 THOC1Q96FV9 657 aaKnown RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 DHRS1Q96LJ7 313 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 NSUN5Q96P11 429 aaKnown RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 NEK1Q96PY6 1258 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 TRAPPC9Q96Q05 1148 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 HINFPQ9BQA5 517 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 SIL1Q9H173 461 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 RPAP3Q9H6T3 665 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 CD320Q9NPF0 282 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 HELLSQ9NRZ9 838 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 FBXO9Q9UK97 447 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 ZNF215Q9UL58 517 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 SLC30A1Q9Y6M5 507 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 SLC4A7Q9Y6M7 1214 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 FAM135AQ9P2D6 1515 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 BLMP54132 1417 aaPredicted RBP4.01□□□□□ -1.77
XRCC4-203ENST00000396027 FHOD3Q2V2M9 1422 aa4.01□□□□□ -1.77
XRCC4-203ENST00000396027 SYCE3A1L190 88 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 RASSF10A6NK89 507 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 STXBP3O00186 592 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 MEFVO15553 781 aaPredicted RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 SHOX2O60902 331 aaPredicted RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 SMNDC1O75940 238 aaKnown RBP eCLIP4□□□□□ -1.77
XRCC4-203ENST00000396027 TSPY4P0CV99 314 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 TSPY10P0CW01 314 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 CD8BP10966 210 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 HOXD10P28358 340 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 LMOD1P29536 600 aaPredicted RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 WEE1P30291 646 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 CSTF2P33240 577 aaKnown RBP eCLIP4□□□□□ -1.77
XRCC4-203ENST00000396027 SERPINB8P50452 374 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 CCNHP51946 323 aaPredicted RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 CSE1LP55060 971 aaKnown RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 UBE2HP62256 183 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 PDE1BQ01064 536 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 MPP3Q13368 585 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 MLECQ14165 292 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 SPCS2Q15005 226 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 SGSM1Q2NKQ1 1148 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 TRIM71Q2Q1W2 868 aaKnown RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 Q4G0T1 1027 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 ARHGAP29Q52LW3 1261 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 CCDC93Q567U6 631 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 CFAP70Q5T0N1 1121 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 THOC7Q6I9Y2 204 aaKnown RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 SARM1Q6SZW1 724 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 DNAJC14Q6Y2X3 702 aaPredicted RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 TTLL7Q6ZT98 887 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 ZNF365Q70YC5 407 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 REXO1L1PQ8IX06 675 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 SMG8Q8ND04 991 aaKnown RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 SMC1BQ8NDV3 1235 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 PHC3Q8NDX5 983 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 CCDC110Q8TBZ0 833 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 CHMP7Q8WUX9 453 aaPredicted RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 TBC1D5Q92609 795 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 GATA6Q92908 595 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 KLHDC7BQ96G42 594 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 SNF8Q96H20 258 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 CRELD1Q96HD1 420 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 RPGRIP1Q96KN7 1286 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 SPZ1Q9BXG8 430 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 RTFDC1Q9BY42 306 aaPredicted RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 ZCCHC4Q9H5U6 513 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 SYNCQ9H7C4 482 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 ZWILCHQ9H900 591 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 KIF9Q9HAQ2 790 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 OSGEPQ9NPF4 335 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 DMAP1Q9NPF5 467 aaPredicted RBP4□□□□□ -1.77
XRCC4-203ENST00000396027 ZBTB40Q9NUA8 1239 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 PDRG1Q9NUG6 133 aa4□□□□□ -1.77
XRCC4-203ENST00000396027 TBCCD1Q9NVR7 557 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms