RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 H7BY64 318 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 KCNK3O14649 394 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 GSTA4O15217 222 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 CYP26A1O43174 497 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 NPHS1O60500 1241 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 ULK1O75385 1050 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 MT-CO1P00395 513 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 COL6A2P12110 1019 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 GTF2A2P52657 109 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 ARHGAP44Q17R89 818 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 HHIPL2Q6UWX4 724 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 C11orf74Q86VG3 221 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 NOSTRINQ8IVI9 506 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 PLEKHO2Q8TD55 490 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 SH3RF2Q8TEC5 729 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 TMEM169Q96HH4 297 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 MAP6Q96JE9 813 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 CAMKK2Q96RR4 588 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 JMJD8Q96S16 334 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 MTA3Q9BTC8 594 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 BOCQ9BWV1 1114 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 ZNF180Q9UJW8 692 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 SPEF1Q9Y4P9 236 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 FADS2P1A8MWK0 482 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 MAN2B1O00754 1011 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 KIF3BO15066 747 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 NKRFO15226 690 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 KRT37O76014 449 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 KRT15P19012 456 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 SESN3P58005 492 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 KLF1Q13351 362 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 GPR19Q15760 415 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 CRY1Q16526 586 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 DDB1Q16531 1140 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 PTPN21Q16825 1174 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 BROXQ5VW32 411 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 NXNQ6DKJ4 435 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 ARHGAP36Q6ZRI8 547 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 CEP68Q76N32 757 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 SLCO6A1Q86UG4 719 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 PTRH1Q86Y79 214 aaKnown RBP6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 CMIPQ8IY22 773 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 MYO1HQ8N1T3 1032 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 TTC8Q8TAM2 541 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 PANK1Q8TE04 598 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 AHCYL2Q96HN2 611 aaKnown RBP6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 FUBP3Q96I24 572 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 C14orf119Q9NWQ9 140 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 MARCH2Q9P0N8 246 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 PIM2Q9P1W9 311 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 ADGRE2Q9UHX3 823 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 X6R8D5 127 aa6.69□□□□□ -1.34
HMGB1P10-201ENST00000395823 SLC12A8A0AV02 714 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 MYBL2P10244 700 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 FOSL1P15407 271 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 HOXA10P31260 410 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 IRF9Q00978 393 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 PCBP2Q15366 365 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 SEC23AQ15436 765 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 TERF2Q15554 542 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 FAM102BQ5T8I3 360 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 ANGEL2Q5VTE6 544 aaKnown RBP6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 HLA-DQA1Q5Y7H0 255 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 OTOP3Q7RTS5 596 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 TCEAL8Q8IYN2 117 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 JPH3Q8WXH2 748 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 LINC01599Q8WXQ3 324 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 ELF4Q99607 663 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 SLC13A1Q9BZW2 595 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 TOPORSQ9NS56 1045 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 NOB1Q9ULX3 412 aaKnown RBP6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 SPO11Q9Y5K1 396 aa6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 TTBK1Q5TCY1 1321 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P10-201ENST00000395823 C22orf46C9J442 243 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 RNF225M0QZC1 329 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 PEX14O75381 377 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 RFPL1O75677 317 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 H2AFB1P0C5Y9 115 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 H2AFB2P0C5Z0 115 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 GNAT1P11488 350 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 ATF3P18847 181 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 SLC9A1P19634 815 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 CD96P40200 585 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 SMAD3P84022 425 aaKnown RBP6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 SMAD2Q15796 467 aaKnown RBP6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 MAP9Q49MG5 647 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 KIAA1958Q8N8K9 716 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 C1orf162Q8NEQ5 155 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 PIP4K2CQ8TBX8 421 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 TRMT2BQ96GJ1 504 aaKnown RBP6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 CCDC136Q96JN2 1154 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 EPB41L1Q9H4G0 881 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 ZMAT4Q9H898 229 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 TNFRSF10DQ9UBN6 386 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 IP6K2Q9UHH9 426 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 SRPK3Q9UPE1 567 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 LUC7L2Q9Y383 392 aaKnown RBP6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 RWDD3Q9Y3V2 267 aa6.67□□□□□ -1.34
HMGB1P10-201ENST00000395823 LCHNA4D1U4 455 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms