RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.26□□□□□ -0.61
C9orf85-202ENST00000377027 CYP4X1Q8N118 509 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 CHURC1Q8WUH1 139 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 NUP133Q8WUM0 1156 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 CLEC4DQ8WXI8 215 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 KIAA1217Q5T5P2 1943 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 NEDD4P46934 1319 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 FRMPD2Q68DX3 1309 aaPredicted RBP11.26□□□□□ -0.61
C9orf85-202ENST00000377027 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
C9orf85-202ENST00000377027 GRXCR1A8MXD5 290 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 IGHDP01880 384 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 ICAM1P05362 532 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 SLC3A2P08195 630 aaKnown RBP11.25□□□□□ -0.61
C9orf85-202ENST00000377027 SNHG28P0DPA3 235 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 PDHBP11177 359 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 CSF2RAP15509 400 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 TNFAIP2Q03169 654 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 IKQ13123 557 aaPredicted RBP11.25□□□□□ -0.61
C9orf85-202ENST00000377027 AGERQ15109 404 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 TKFCQ3LXA3 575 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 EEPD1Q7L9B9 569 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 SMC5Q8IY18 1101 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 USP38Q8NB14 1042 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
C9orf85-202ENST00000377027 DCAF4Q8WV16 495 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 GLT1D1Q96MS3 346 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 PPP1R12CQ9BZL4 782 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 LNPKQ9C0E8 428 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 IL25Q9H293 177 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 TCP11L1Q9NUJ3 509 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 CCPG1Q9ULG6 757 aa11.25□□□□□ -0.61
C9orf85-202ENST00000377027 ISY1Q9ULR0 285 aaKnown RBP11.25□□□□□ -0.61
C9orf85-202ENST00000377027 CTDP1Q9Y5B0 961 aaPredicted RBP11.25□□□□□ -0.61
C9orf85-202ENST00000377027 DCDC2CA8MYV0 355 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 ACRP10323 421 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 CYP2C18P33260 490 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 PSMC6P62333 389 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 BAATQ14032 418 aaPredicted RBP11.24□□□□□ -0.61
C9orf85-202ENST00000377027 GRIN2CQ14957 1233 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 CCDC96Q2M329 555 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 MCMDC2Q4G0Z9 681 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 RRP12Q5JTH9 1297 aaKnown RBP11.24□□□□□ -0.61
C9orf85-202ENST00000377027 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 NSMFQ6X4W1 530 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 PCSK9Q8NBP7 692 aaKnown RBP11.24□□□□□ -0.61
C9orf85-202ENST00000377027 WNT8AQ9H1J5 351 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 CXXC1Q9P0U4 656 aaPredicted RBP11.24□□□□□ -0.61
C9orf85-202ENST00000377027 CCDC171Q6TFL3 1326 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 TET1Q8NFU7 2136 aa11.24□□□□□ -0.61
C9orf85-202ENST00000377027 TTC24A2A3L6 582 aaPredicted RBP11.23□□□□□ -0.61
C9orf85-202ENST00000377027 ASB14A6NK59 587 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 B4GALT4O60513 344 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 TOP1P11387 765 aaKnown RBP11.23□□□□□ -0.61
C9orf85-202ENST00000377027 ALDH5A1P51649 535 aaPredicted RBP11.23□□□□□ -0.61
C9orf85-202ENST00000377027 ZNF543Q08ER8 600 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 MCM6Q14566 821 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
C9orf85-202ENST00000377027 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 MAFAQ8NHW3 353 aaPredicted RBP11.23□□□□□ -0.61
C9orf85-202ENST00000377027 PPP1R13LQ8WUF5 828 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 PBX4Q9BYU1 374 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 TRPV6Q9H1D0 765 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
C9orf85-202ENST00000377027 TMEM265A0A087WTH1 108 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 RBM47A0AV96 593 aaKnown RBP11.22□□□□□ -0.61
C9orf85-202ENST00000377027 DYNC1LI2O43237 492 aaPredicted RBP11.22□□□□□ -0.61
C9orf85-202ENST00000377027 SDSP20132 328 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 EDNRBP24530 442 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 MYO9BQ13459 2157 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 AKNAD1Q5T1N1 836 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 ZNF365Q70YC5 407 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 OCSTAMPQ9BR26 566 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 ZKSCAN3Q9BRR0 538 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 NOC4LQ9BVI4 516 aaKnown RBP11.22□□□□□ -0.61
C9orf85-202ENST00000377027 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 GPSM3Q9Y4H4 160 aa11.22□□□□□ -0.61
C9orf85-202ENST00000377027 TTC28Q96AY4 2481 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 TRIP12Q14669 1992 aaPredicted RBP11.21□□□□□ -0.61
C9orf85-202ENST00000377027 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.21□□□□□ -0.61
C9orf85-202ENST00000377027 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.21□□□□□ -0.61
C9orf85-202ENST00000377027 GPR37L1O60883 481 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 ARIH2O95376 493 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 FOSL2P15408 326 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 NUCB1Q02818 461 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 PTK2Q05397 1052 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 DUSP28Q4G0W2 176 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 EXOC6Q8TAG9 804 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 FAM174AQ8TBP5 190 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 TBC1D5Q92609 795 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 COPS5Q92905 334 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 ARHGAP9Q9BRR9 750 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 C1QTNF2Q9BXJ5 285 aa11.21□□□□□ -0.61
C9orf85-202ENST00000377027 OSBPL3Q9H4L5 887 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms