RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 ZNF200P98182 395 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-202ENST00000374426 PTK7Q13308 1070 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 HIC1Q14526 733 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 MBTPS1Q14703 1052 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 SEC23AQ15436 765 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 IFIT1BQ5T764 474 aaKnown RBP16.05■□□□□ 0.16
CXCL12-202ENST00000374426 STOX1Q6ZVD7 989 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
CXCL12-202ENST00000374426 PDCD2LQ9BRP1 358 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 ZBED2Q9BTP6 218 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 CNNM2Q9H8M5 875 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
CXCL12-202ENST00000374426 ABHD14A-ACY1A0A1B0GW23 586 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 ZBTB5O15062 677 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 PPFIA4O75335 1185 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 GJB5O95377 273 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-202ENST00000374426 HOXA13P31271 388 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-202ENST00000374426 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 HSDL1Q3SXM5 330 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 ZNF618Q5T7W0 954 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 MYSM1Q5VVJ2 828 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 CYB5R4Q7L1T6 521 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 VSIG10LQ86VR7 867 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 IL31RAQ8NI17 732 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 GDPD5Q8WTR4 605 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 MAP3K20Q9NYL2 800 aaKnown RBP16.04■□□□□ 0.16
CXCL12-202ENST00000374426 PCDHA1Q9Y5I3 950 aa16.04■□□□□ 0.16
CXCL12-202ENST00000374426 COL4A4P53420 1690 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-202ENST00000374426 SORBS3O60504 671 aa16.03■□□□□ 0.16
CXCL12-202ENST00000374426 SP2Q02086 613 aa16.03■□□□□ 0.16
CXCL12-202ENST00000374426 PGM5Q15124 567 aa16.03■□□□□ 0.16
CXCL12-202ENST00000374426 CELF3Q5SZQ8 465 aaKnown RBP16.03■□□□□ 0.16
CXCL12-202ENST00000374426 HLA-CQ95604 372 aa16.03■□□□□ 0.16
CXCL12-202ENST00000374426 SPATA33Q96N06 139 aa16.03■□□□□ 0.16
CXCL12-202ENST00000374426 RAD9AQ99638 391 aa16.03■□□□□ 0.16
CXCL12-202ENST00000374426 MYH7BA7E2Y1 1941 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 LINC01553A4QN01 128 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 PALM3A6NDB9 673 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-202ENST00000374426 EFCAB14O75071 495 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 GGPS1O95749 300 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.16
CXCL12-202ENST00000374426 IKBKEQ14164 716 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 KCNV1Q6PIU1 500 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 GPKOWQ92917 476 aaPredicted RBP eCLIP16.02■□□□□ 0.16
CXCL12-202ENST00000374426 C16orf70Q9BSU1 422 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 LMCD1Q9NZU5 365 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
CXCL12-202ENST00000374426 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.15
CXCL12-202ENST00000374426 ERVK-21P61565 698 aa16.01■□□□□ 0.15
CXCL12-202ENST00000374426 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-202ENST00000374426 SERINC5Q86VE9 423 aa16.01■□□□□ 0.15
CXCL12-202ENST00000374426 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
CXCL12-202ENST00000374426 SAMD3Q8N6K7 520 aa16.01■□□□□ 0.15
CXCL12-202ENST00000374426 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-202ENST00000374426 TGS1Q96RS0 853 aaKnown RBP16.01■□□□□ 0.15
CXCL12-202ENST00000374426 C1QTNF1Q9BXJ1 281 aa16.01■□□□□ 0.15
CXCL12-202ENST00000374426 LGR5O75473 907 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 TGFB3P10600 412 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 GRM4Q14833 912 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 FAM117BQ6P1L5 589 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16■□□□□ 0.15
CXCL12-202ENST00000374426 EXOC6Q8TAG9 804 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 PIGSQ96S52 555 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 BCAS3Q9H6U6 928 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 RIOX1Q9H6W3 641 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 SENP2Q9HC62 589 aa16■□□□□ 0.15
CXCL12-202ENST00000374426 EMSYQ7Z589 1322 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 GCOM1H8Y6P7 765 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-202ENST00000374426 CYTH3O43739 400 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 POLR2MP0CAP2 368 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 CCND2P30279 289 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 HOXC8P31273 242 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 THPOP40225 353 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 DBF4BQ8NFT6 615 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 EPHX3Q9H6B9 360 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 MLXIPQ9HAP2 919 aa15.99■□□□□ 0.15
CXCL12-202ENST00000374426 C17orf102A2RUQ5 167 aa15.98■□□□□ 0.15
CXCL12-202ENST00000374426 RSPH10B2B2RC85 870 aa15.98■□□□□ 0.15
CXCL12-202ENST00000374426 H3BRB1 525 aa15.98■□□□□ 0.15
CXCL12-202ENST00000374426 RSPH10BP0C881 870 aa15.98■□□□□ 0.15
CXCL12-202ENST00000374426 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
CXCL12-202ENST00000374426 ATP6V0A1Q93050 837 aa15.98■□□□□ 0.15
CXCL12-202ENST00000374426 TUT1Q9H6E5 874 aaKnown RBP15.98■□□□□ 0.15
CXCL12-202ENST00000374426 INSL6Q9Y581 213 aa15.98■□□□□ 0.15
CXCL12-202ENST00000374426 FRMPD4Q14CM0 1322 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 SIP14410 1827 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 PNMA6FA0A0J9YX94 578 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 IFIT3O14879 490 aaKnown RBP15.97■□□□□ 0.15
CXCL12-202ENST00000374426 LGALS2P05162 132 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 CYP21A2P08686 494 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 SMIM10L2AP0DMW4 78 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 SMIM10L2BP0DMW5 78 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 PDE4AP27815 886 aa15.97■□□□□ 0.15
CXCL12-202ENST00000374426 MRPS9P82933 396 aaKnown RBP15.97■□□□□ 0.15
CXCL12-202ENST00000374426 HTRA4P83105 476 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-202ENST00000374426 TROAPQ12815 778 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms