RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 GPBP1Q86WP2 473 aa20.82■□□□□ 0.92
USP49-202ENST00000373010 GOLGA1Q92805 767 aa20.82■□□□□ 0.92
USP49-202ENST00000373010 ZNHIT6Q9NWK9 470 aaKnown RBP20.82■□□□□ 0.92
USP49-202ENST00000373010 EPHB6O15197 1021 aa20.82■□□□□ 0.92
USP49-202ENST00000373010 HOXA13P31271 388 aaPredicted RBP20.82■□□□□ 0.92
USP49-202ENST00000373010 ECE1P42892 770 aa20.82■□□□□ 0.92
USP49-202ENST00000373010 MAN2A1Q16706 1144 aa20.82■□□□□ 0.92
USP49-202ENST00000373010 SRGAP1Q7Z6B7 1085 aa20.82■□□□□ 0.92
USP49-202ENST00000373010 ETNPPLQ8TBG4 499 aa20.82■□□□□ 0.92
USP49-202ENST00000373010 NHEJ1Q9H9Q4 299 aaPredicted RBP20.82■□□□□ 0.92
USP49-202ENST00000373010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.82■□□□□ 0.92
USP49-202ENST00000373010 SIK3Q9Y2K2 1263 aa20.82■□□□□ 0.92
USP49-202ENST00000373010 POTEFA5A3E0 1075 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 OPLAHO14841 1288 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 POTEIP0CG38 1075 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 ZSCAN20P17040 1043 aaPredicted RBP20.81■□□□□ 0.92
USP49-202ENST00000373010 EZH2Q15910 746 aaKnown RBP20.81■□□□□ 0.92
USP49-202ENST00000373010 POTEGQ6S5H5 508 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 POTEEQ6S8J3 1075 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 GPR161Q8N6U8 529 aaKnown RBP20.81■□□□□ 0.92
USP49-202ENST00000373010 SUPT20HQ8NEM7 779 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 TSG101Q99816 390 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 BMP2KQ9NSY1 1161 aaPredicted RBP20.81■□□□□ 0.92
USP49-202ENST00000373010 ARGLU1Q9NWB6 273 aaPredicted RBP20.81■□□□□ 0.92
USP49-202ENST00000373010 FAM53CQ9NYF3 392 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 MYO1AQ9UBC5 1043 aa20.81■□□□□ 0.92
USP49-202ENST00000373010 FGFR1OPO95684 399 aaKnown RBP20.8■□□□□ 0.92
USP49-202ENST00000373010 RXRBP28702 533 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 CHMP4BP1P59074 171 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 SPIRE1Q08AE8 756 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 FIGNQ5HY92 759 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 KIAA1755Q5JYT7 1200 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 MOXD1Q6UVY6 613 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 SLFN12Q8IYM2 578 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 LENG9Q96B70 501 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 FAM207AQ9NSI2 230 aaPredicted RBP20.8■□□□□ 0.92
USP49-202ENST00000373010 A0A1W2PQJ5 194 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 SPDYE3A6NKU9 549 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 FAM86B1E9PN63 330 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 RAD17O75943 681 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 SEC31AO94979 1220 aaKnown RBP20.8■□□□□ 0.92
USP49-202ENST00000373010 FAM86B2P0C5J1 330 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 NCAPH2Q6IBW4 605 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 RABGGTAQ92696 567 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 PRR12Q9ULL5 1215 aa20.8■□□□□ 0.92
USP49-202ENST00000373010 CYP11B2P19099 503 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 ZCWPW2Q504Y3 356 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 TMCO3Q6UWJ1 677 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 BTNL9Q6UXG8 535 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 NELFCDQ8IXH7 590 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 KRT222Q8N1A0 295 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 ACER1Q8TDN7 264 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 HAUS4Q9H6D7 363 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 MMRN2Q9H8L6 949 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 PCDHA2Q9Y5H9 948 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 FHOD1Q9Y613 1164 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 RCCD1A6NED2 376 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 PLEKP08567 350 aaPredicted RBP20.79■□□□□ 0.92
USP49-202ENST00000373010 CYLC1P35663 651 aaPredicted RBP20.79■□□□□ 0.92
USP49-202ENST00000373010 PSMC6P62333 389 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 EN1Q05925 392 aaPredicted RBP20.79■□□□□ 0.92
USP49-202ENST00000373010 CCDC122Q5T0U0 273 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 KIAA1328Q86T90 577 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 CATSPER3Q86XQ3 398 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 GPIHBP1Q8IV16 184 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 CCDC65Q8IXS2 484 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 CCDC155Q8N6L0 562 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 PARD6BQ9BYG5 372 aa20.79■□□□□ 0.92
USP49-202ENST00000373010 PDGFDQ9GZP0 370 aaPredicted RBP20.79■□□□□ 0.92
USP49-202ENST00000373010 SPDYE2BA6NHP3 402 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 TRAF5O00463 557 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 MEIS1O00470 390 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 ZRANB2O95218 330 aaKnown RBP eCLIP20.78■□□□□ 0.92
USP49-202ENST00000373010 SPDYE6P0CI01 402 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 SREBF1P36956 1147 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 MMP14P50281 582 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 Q4G0T1 1027 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 ARSHQ5FYA8 562 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 HERC4Q5GLZ8 1057 aaPredicted RBP20.78■□□□□ 0.92
USP49-202ENST00000373010 CYP2W1Q8TAV3 490 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 TMOD2Q9NZR1 351 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 COL2A1P02458 1487 aaPredicted RBP20.78■□□□□ 0.92
USP49-202ENST00000373010 ABCB11O95342 1321 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 KRT83P78385 493 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 CYP27A1Q02318 531 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 BMS1Q14692 1282 aaKnown RBP20.78■□□□□ 0.92
USP49-202ENST00000373010 CEP112Q8N8E3 955 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 PSME4Q14997 1843 aa20.78■□□□□ 0.92
USP49-202ENST00000373010 FOSP01100 380 aaPredicted RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 KRT18P05783 430 aaKnown RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 PNMA6AP0CW24 399 aaPredicted RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 HOXA7P31268 230 aaPredicted RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 SLC12A3P55017 1021 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 RSBN1LQ6PCB5 846 aaPredicted RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 JAKMIP2Q96AA8 810 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 TANGO6Q9C0B7 1094 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 LACRTQ9GZZ8 138 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 ZHX3Q9H4I2 956 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 STK32BQ9NY57 414 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms