RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TMEM119Q4V9L6 283 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 GPAT2Q6NUI2 795 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 BLZF1Q9H2G9 400 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 RMND1Q9NWS8 449 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 CYP39A1Q9NYL5 469 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 EIF2AK2P19525 551 aaKnown RBP29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 CASP1P29466 404 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 LRCH2Q5VUJ6 765 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 POTEEQ6S8J3 1075 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 ZNF526Q8TF50 670 aaPredicted RBP29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 NUDT12Q9BQG2 462 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 PDCD2LQ9BRP1 358 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 SPATC1LQ9H0A9 340 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 A1CFQ9NQ94 594 aaKnown RBP29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 VAV3Q9UKW4 847 aa29.52■■■□□ 2.32
ATPAF1-202ENST00000371937 CETPP11597 493 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 BMP6P22004 513 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 GTF2A2P52657 109 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 SEMA3FQ13275 785 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 SV2BQ7L1I2 683 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 DHX40Q8IX18 779 aaKnown RBP29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 IL31RAQ8NI17 732 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 NSUN6Q8TEA1 469 aaKnown RBP29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 LRRC15Q8TF66 581 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 ZNF577Q9BSK1 485 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 UBIAD1Q9Y5Z9 338 aa29.51■■■□□ 2.31
ATPAF1-202ENST00000371937 ITGB5P18084 799 aa29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 NCAPH2Q6IBW4 605 aa29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 CHADLQ6NUI6 762 aa29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 PNMA3Q9UL41 463 aa29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 SMTNL1A8MU46 457 aa29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 PSMD10O75832 226 aa29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 LARP4BQ92615 738 aaKnown RBP29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 WDR11Q9BZH6 1224 aa29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 LRRC27Q9C0I9 530 aa29.5■■■□□ 2.31
ATPAF1-202ENST00000371937 GAS7O60861 476 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 RPN1P04843 607 aaKnown RBP29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 ARP10275 920 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 COPB2P35606 906 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 MRPS9P82933 396 aaKnown RBP29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 CT47A1Q5JQC4 288 aaPredicted RBP29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 OTOP1Q7RTM1 612 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 AOPEPQ8N6M6 819 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 RAD54LQ92698 747 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 PPP1R9BQ96SB3 815 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 RIT2Q99578 217 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 PAGR1Q9BTK6 254 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 JADE2Q9NQC1 790 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 BLOC1S4Q9NUP1 217 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 PFASO15067 1338 aa29.49■■■□□ 2.31
ATPAF1-202ENST00000371937 IPO5O00410 1097 aaKnown RBP29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 SLC25A27O95847 323 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 CCND2P30279 289 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 PPP2R5CQ13362 524 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 C7orf25Q9BPX7 421 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 KCNH7Q9NS40 1196 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 IKBKBO14920 756 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 RPA1P27694 616 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 ANKRD35Q8N283 1001 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 GTF3C2Q8WUA4 911 aaPredicted RBP29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 ZFP91Q96JP5 570 aaPredicted RBP29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 SLC45A1Q9Y2W3 748 aa29.48■■■□□ 2.31
ATPAF1-202ENST00000371937 ITGBL1O95965 494 aaPredicted RBP29.47■■■□□ 2.31
ATPAF1-202ENST00000371937 MYCLP12524 364 aaPredicted RBP29.47■■■□□ 2.31
ATPAF1-202ENST00000371937 VSIG10LQ86VR7 867 aa29.47■■■□□ 2.31
ATPAF1-202ENST00000371937 KCTD17Q8N5Z5 321 aa29.47■■■□□ 2.31
ATPAF1-202ENST00000371937 MS4A4AQ96JQ5 239 aa29.47■■■□□ 2.31
ATPAF1-202ENST00000371937 TRIM9Q9C026 710 aa29.47■■■□□ 2.31
ATPAF1-202ENST00000371937 NR3C2P08235 984 aa29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 ZBTB48P10074 688 aaPredicted RBP29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 TPM4P67936 248 aa29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 PLCB2Q00722 1185 aa29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 MTMR1Q13613 665 aa29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 KCNB1Q14721 858 aa29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 ECM1Q16610 540 aa29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 CCDC47Q96A33 483 aaKnown RBP29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 TEKT3Q9BXF9 490 aa29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 KIAA1024Q9UPX6 916 aa29.46■■■□□ 2.31
ATPAF1-202ENST00000371937 CNMDO75829 334 aa29.45■■■□□ 2.31
ATPAF1-202ENST00000371937 NCAPG2Q86XI2 1143 aa29.45■■■□□ 2.31
ATPAF1-202ENST00000371937 PDLIM2Q96JY6 352 aa29.45■■■□□ 2.31
ATPAF1-202ENST00000371937 PURBQ96QR8 312 aaKnown RBP29.45■■■□□ 2.31
ATPAF1-202ENST00000371937 POLR3CQ9BUI4 534 aaPredicted RBP29.45■■■□□ 2.31
ATPAF1-202ENST00000371937 MOV10L1Q9BXT6 1211 aaKnown RBP29.45■■■□□ 2.31
ATPAF1-202ENST00000371937 RBPJLQ9UBG7 517 aa29.45■■■□□ 2.31
ATPAF1-202ENST00000371937 MCM6Q14566 821 aa29.45■■■□□ 2.3
ATPAF1-202ENST00000371937 CST9Q5W186 159 aa29.45■■■□□ 2.3
ATPAF1-202ENST00000371937 CATSPER3Q86XQ3 398 aa29.45■■■□□ 2.3
ATPAF1-202ENST00000371937 DNERQ8NFT8 737 aa29.45■■■□□ 2.3
ATPAF1-202ENST00000371937 CCL15-CCL14A0A0B4J2E2 113 aa29.44■■■□□ 2.3
ATPAF1-202ENST00000371937 POTEB3A0JP26 581 aa29.44■■■□□ 2.3
ATPAF1-202ENST00000371937 MED24O75448 989 aa29.44■■■□□ 2.3
ATPAF1-202ENST00000371937 CCL15Q16663 113 aa29.44■■■□□ 2.3
ATPAF1-202ENST00000371937 SPRYD7Q5W111 196 aa29.44■■■□□ 2.3
ATPAF1-202ENST00000371937 POTEBQ6S5H4 581 aa29.44■■■□□ 2.3
ATPAF1-202ENST00000371937 GTPBP4Q9BZE4 634 aaKnown RBP29.44■■■□□ 2.3
ATPAF1-202ENST00000371937 AGO4Q9HCK5 861 aaKnown RBP29.44■■■□□ 2.3
ATPAF1-202ENST00000371937 PEX10O60683 326 aa29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 STAM2O75886 525 aa29.43■■■□□ 2.3
ATPAF1-202ENST00000371937 MYL5Q02045 173 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 425.2 ms