RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 DPY19L2P1Q6NXN4 242 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 SPATA5Q8NB90 893 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 HELBQ8NG08 1087 aaPredicted RBP12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 UBAC1Q9BSL1 405 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 LINGO3P0C6S8 592 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 CCNE1P24864 410 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 SPICE1Q8N0Z3 855 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 CEP120Q8N960 986 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 ATP8B4Q8TF62 1192 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 PRCCQ92733 491 aaPredicted RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 TRIM9Q9C026 710 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.354e-8■■■■□ 19.8
SMARCA1-201ENST00000371121 FBXL5Q9UKA1 691 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 SHBGP04278 402 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 MAGOHP61326 146 aaKnown RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 VWA3BQ502W6 1294 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 SEC14L1Q92503 715 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 MAGOHBQ96A72 148 aaKnown RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 MMTAG2Q9BU76 263 aaKnown RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 ITGA4P13612 1032 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 MAGEA1P43355 309 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 POU5F1Q01860 360 aaKnown RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 BIRC2Q13490 618 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 SPA17Q15506 151 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 NAB2Q15742 525 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 CCDC181Q5TID7 509 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 ARL6IP4Q66PJ3 421 aaKnown RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 CENPPQ6IPU0 288 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 CCDC70Q6NSX1 233 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 LDHAL6AQ6ZMR3 332 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 LRRC55Q6ZSA7 311 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 RRAGAQ7L523 313 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 ANKLE1Q8NAG6 615 aa12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 DHTKD1Q96HY7 919 aaPredicted RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 NOVA2Q9UNW9 492 aaKnown RBP12.86□□□□□ -0.35
SMARCA1-201ENST00000371121 ZNF142P52746 1687 aaPredicted RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 WTIPA6NIX2 430 aaPredicted RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 PDXDC1Q6P996 788 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 DHX37Q8IY37 1157 aaKnown RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 ZBTB38Q8NAP3 1195 aaPredicted RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 NR2E1Q9Y466 385 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 CCT8L1PA6NM43 557 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 KIF3CO14782 793 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 TRIM37O94972 964 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 BMP15O95972 392 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 ZNF268Q14587 947 aaPredicted RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 HIBCHQ6NVY1 386 aaPredicted RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 CRELD2Q6UXH1 353 aaPredicted RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 KLHL7Q8IXQ5 586 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 OLIG1Q8TAK6 271 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 BORCS6Q96GS4 357 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 ABCF3Q9NUQ8 709 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 GOLGA6L7A0A1B0GV03 622 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 RIPK1Q13546 671 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 LRRC57Q8N9N7 239 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 SPDL1Q96EA4 605 aa12.85□□□□□ -0.35
SMARCA1-201ENST00000371121 A0A087X0T9 212 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 PSMA7O14818 248 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 SART1O43290 800 aaKnown RBP12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 FAM228BP0C875 321 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 RARAP10276 462 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 IRX1P78414 480 aaPredicted RBP12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 EHHADHQ08426 723 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 TRIM28Q13263 835 aaKnown RBP12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 NAA25Q14CX7 972 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 RNF10Q8N5U6 811 aaKnown RBP12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 MICAL1Q8TDZ2 1067 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 THRAP3Q9Y2W1 955 aaKnown RBP12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 BCL9O00512 1426 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 F8VZ95 297 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 GCOM1H8Y6P7 765 aaPredicted RBP12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 CAND2O75155 1236 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 FGRP09769 529 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 MYZAPP0CAP1 466 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 PLCG1P19174 1290 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 PTPROQ16827 1216 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 NLRP3Q96P20 1036 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 FAM129AQ9BZQ8 928 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 NLRP2Q9NX02 1062 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 TAF1P21675 1872 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 A6NHS1 94 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 PAFAH1B1P43034 410 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms