RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 USP38Q8NB14 1042 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 ZCRB1Q8TBF4 217 aaKnown RBP10.63□□□□□ -0.71
LRRC40-201ENST00000370952 TBC1D5Q92609 795 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 MAGOHBQ96A72 148 aaKnown RBP10.63□□□□□ -0.71
LRRC40-201ENST00000370952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.63□□□□□ -0.71
LRRC40-201ENST00000370952 KANSL2Q9H9L4 492 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 TSKSQ9UJT2 592 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 DUOX1Q9NRD9 1551 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 FLT1P17948 1338 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 TMCO5BA8MYB1 307 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 TLR2O60603 784 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 DDAH1O94760 285 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 TNNC1P63316 161 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 MAN2A1Q16706 1144 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 MSL1Q68DK7 614 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 DYMQ7RTS9 669 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 RNF10Q8N5U6 811 aaKnown RBP10.63□□□□□ -0.71
LRRC40-201ENST00000370952 TATDN2Q93075 761 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 STAMBPL1Q96FJ0 436 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 CARD10Q9BWT7 1032 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 CCSER1Q9C0I3 900 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 DDX47Q9H0S4 455 aaKnown RBP10.63□□□□□ -0.71
LRRC40-201ENST00000370952 ISCUQ9H1K1 167 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 RNF14Q9UBS8 474 aa10.63□□□□□ -0.71
LRRC40-201ENST00000370952 A0A1B0GUA9 196 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 PDE6BP35913 854 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 XRCC4Q13426 336 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 CRYMQ14894 314 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 MEI1Q5TIA1 1274 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 GKAP1Q5VSY0 366 aaPredicted RBP10.62□□□□□ -0.71
LRRC40-201ENST00000370952 C1orf131Q8NDD1 294 aaKnown RBP10.62□□□□□ -0.71
LRRC40-201ENST00000370952 TCP11Q8WWU5 503 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 THOC1Q96FV9 657 aaKnown RBP10.62□□□□□ -0.71
LRRC40-201ENST00000370952 TRIM6Q9C030 488 aaPredicted RBP10.62□□□□□ -0.71
LRRC40-201ENST00000370952 NOD2Q9HC29 1040 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 ANAPC4Q9UJX5 808 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 MROH5Q6ZUA9 1318 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 SRRM3A6NNA2 597 aaPredicted RBP10.62□□□□□ -0.71
LRRC40-201ENST00000370952 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 USP17L21D6R901 530 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 CEP104O60308 925 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 PDE8AO60658 829 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 ATP6V1G2O95670 118 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 CDC25CP30307 473 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 ELF3P78545 371 aaPredicted RBP10.62□□□□□ -0.71
LRRC40-201ENST00000370952 KCNMA1Q12791 1236 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 MYO1EQ12965 1108 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 LRRC41Q15345 812 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 KIAA0753Q2KHM9 967 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 KRT71Q3SY84 523 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 LRIG3Q6UXM1 1119 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 PROSER2Q86WR7 435 aaPredicted RBP10.62□□□□□ -0.71
LRRC40-201ENST00000370952 CCDC50Q8IVM0 306 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 STAG2Q8N3U4 1231 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 GLIS3Q8NEA6 775 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 CCT6BQ92526 530 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 ATP6V0A4Q9HBG4 840 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 PCDHA4Q9UN74 947 aa10.62□□□□□ -0.71
LRRC40-201ENST00000370952 A0A087X0T9 212 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 GRID2IPA4D2P6 1211 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
LRRC40-201ENST00000370952 DAPK3O43293 454 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 MYL1P05976 194 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 CLTAP09496 248 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 FAM228BP0C875 321 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 CALML3P27482 149 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 SLC8A1P32418 973 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 SLC9C1Q4G0N8 1177 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 CENPPQ6IPU0 288 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 CCDC84Q86UT8 332 aaPredicted RBP10.61□□□□□ -0.71
LRRC40-201ENST00000370952 PNMA8AQ86V59 439 aaPredicted RBP10.61□□□□□ -0.71
LRRC40-201ENST00000370952 TAF4BQ92750 862 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 ADAMTS1Q9UHI8 967 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 PCDHA6Q9UN73 950 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 L3MBTL1Q9Y468 752 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 PCDHA8Q9Y5H6 950 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 COL18A1P39060 1754 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 PLCH1Q4KWH8 1693 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 C5orf60A6NFR6 353 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 WTIPA6NIX2 430 aaPredicted RBP10.61□□□□□ -0.71
LRRC40-201ENST00000370952 ERVV-2B6SEH9 535 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 MGRN1O60291 552 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 BUB1BO60566 1050 aaPredicted RBP10.61□□□□□ -0.71
LRRC40-201ENST00000370952 RTN2O75298 545 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 DRD4P21917 467 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 TECP42680 631 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 POLR2FP61218 127 aaKnown RBP10.61□□□□□ -0.71
LRRC40-201ENST00000370952 NAB2Q15742 525 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 RUFY4Q6ZNE9 571 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 LRRC45Q96CN5 670 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 TCP11L1Q9NUJ3 509 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 ASAP1Q9ULH1 1129 aa10.61□□□□□ -0.71
LRRC40-201ENST00000370952 PCDH11XQ9BZA7 1347 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 PCDH11YQ9BZA8 1340 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 SSU72P8A0A1W2PR75 194 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 PPP1R12AO14974 1030 aaPredicted RBP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 MYBP10242 640 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 CYP2D6P10635 497 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 CCNHP51946 323 aaPredicted RBP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 RAPGEF1Q13905 1077 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms