RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 PDE6BP35913 854 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 GATA4P43694 442 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 MASP1P48740 699 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 MRPS5P82675 430 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ATP11AP98196 1134 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 CRHR2Q13324 411 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 SIM2Q14190 667 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 RSPO4Q2I0M5 234 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 C10orf62Q5T681 223 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 INTS5Q6P9B9 1019 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 HOMER1Q86YM7 354 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 TMEM102Q8N9M5 508 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 VPS37AQ8NEZ2 397 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ATXN2LQ8WWM7 1075 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 GOLGA1Q92805 767 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 DUSP9Q99956 384 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ZKSCAN3Q9BRR0 538 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 BRIP1Q9BX63 1249 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 LRRC27Q9C0I9 530 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 EHD4Q9H223 541 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 RASSF4Q9H2L5 321 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 JPH1Q9HDC5 661 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 FANCLQ9NW38 375 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 THEGQ9P2T0 379 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 INTUQ9ULD6 942 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 SPG7Q9UQ90 795 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 LTN1O94822 1766 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ZSWIM8A7E2V4 1837 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 CD163L1Q9NR16 1453 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 M0R082 166 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 PDE2AO00408 941 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 LILRB5O75023 590 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ACPPP15309 386 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 PTPRAP18433 802 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ATF4P18848 351 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 CHRNA4P43681 627 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 GJA8P48165 433 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 FAM160A1Q05DH4 1040 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 CXCL9Q07325 125 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 BRDTQ58F21 947 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 FAM133BQ5BKY9 247 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 CEP135Q66GS9 1140 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 TBC1D9BQ66K14 1250 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 STYK1Q6J9G0 422 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 C20orf204Q6ZNR8 217 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ZNF417Q8TAU3 575 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 NUDT8Q8WV74 236 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 E2F7Q96AV8 911 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ZNF587Q96SQ5 575 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ALDH8A1Q9H2A2 487 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 LIN7BQ9HAP6 207 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 CHST12Q9NRB3 414 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 LATS2Q9NRM7 1088 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 DZANK1Q9NVP4 752 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 CLIC5Q9NZA1 410 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 NOP53Q9NZM5 478 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ISY1Q9ULR0 285 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 COL5A3P25940 1745 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 DNAH14Q0VDD8 3507 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 PABPN1LA6NDY0 278 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 PRRT4C9JH25 899 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 SLC26A4O43511 780 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 RAD17O75943 681 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 MTA2O94776 668 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 RPN1P04843 607 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 RBP3P10745 1247 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 CCL5P13501 91 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 ANP32AP39687 249 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 HSP90AB3PQ58FF7 597 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 C1QTNF12Q5T7M4 302 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 PEAR1Q5VY43 1037 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 NBPF5PQ86XG9 351 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 LURAP1LQ8IV03 231 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 LMNTD2Q8IXW0 634 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 RAVER1Q8IY67 606 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 EPS8L3Q8TE67 593 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 FRS2Q8WU20 508 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 MASTLQ96GX5 879 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 SETDB2Q96T68 719 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 BHLHE41Q9C0J9 482 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 PPCSQ9HAB8 311 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 FAM86C1Q9NVL1 165 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 PPP4R2Q9NY27 417 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 GTF2A1LQ9UNN4 478 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 FZD1Q9UP38 647 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 ZFYVE26Q68DK2 2539 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 COL2A1P02458 1487 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 NPC1L1Q9UHC9 1359 aa4.17□□□□□ -1.74
ECHDC1-205ENST00000368295 A0A1W2PRQ8 180 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 DYTNA2CJ06 578 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 ALG1L2C9J202 215 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 VAMP4O75379 141 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 TCEA3O75764 348 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 ALDH1L1O75891 902 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 HNRNPCP07910 306 aaKnown RBP eCLIP4.16□□□□□ -1.743e-6■□□□□ 11
ECHDC1-205ENST00000368295 HCLS1P14317 486 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 PMLP29590 882 aa4.16□□□□□ -1.74
ECHDC1-205ENST00000368295 GNA15P30679 374 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms