RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.233e-6■■■■□ 26.6
USF1-203ENST00000368021 TMEM132BQ14DG7 1078 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 STX1AQ16623 288 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 SNRNP48Q6IEG0 339 aaKnown RBP13.59□□□□□ -0.23
USF1-203ENST00000368021 CEP57L1Q8IYX8 460 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 CD99L2Q8TCZ2 262 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 LENG9Q96B70 501 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 PPP1R9BQ96SB3 815 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 DISC1Q9NRI5 854 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 TUBE1Q9UJT0 475 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 PNMA3Q9UL41 463 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 RPTORQ8N122 1335 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 CAP1Q01518 475 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 POSTNQ15063 836 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 MUM1L1Q5H9M0 696 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 SH3RF1Q7Z6J0 888 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 DHX58Q96C10 678 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 FAM20AQ96MK3 541 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 PANK2Q9BZ23 570 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 ARHGAP39Q9C0H5 1083 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
USF1-203ENST00000368021 RNF146Q9NTX7 359 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 CCDC39Q9UFE4 941 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 SLC45A1Q9Y2W3 748 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.24
USF1-203ENST00000368021 MKI67P46013 3256 aaKnown RBP13.58□□□□□ -0.24
USF1-203ENST00000368021 FAM86B1E9PN63 330 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 FAM86B2P0C5J1 330 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 STAT3P40763 770 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 RPS6P62753 249 aaKnown RBP13.57□□□□□ -0.24
USF1-203ENST00000368021 PRR16Q569H4 304 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 NT5DC1Q5TFE4 455 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 ETNPPLQ8TBG4 499 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 FAM200AQ8TCP9 573 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 SYTL5Q8TDW5 730 aaPredicted RBP13.57□□□□□ -0.24
USF1-203ENST00000368021 CUEDC2Q9H467 287 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 HOMER2Q9NSB8 354 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 ANO10Q9NW15 660 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 LRWD1Q9UFC0 647 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 PCDHA12Q9UN75 941 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 RIPK3Q9Y572 518 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 IGLV3-22A0A075B6J6 115 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 SLC26A4O43511 780 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 MARCH6O60337 910 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 CDC25AP30304 524 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 ZNF76P36508 570 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 HERVK_113P62684 666 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 PNOCQ13519 176 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 ZRSR1Q15695 479 aaKnown RBP13.57□□□□□ -0.24
USF1-203ENST00000368021 PDXDC2PQ6P474 469 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 RNF207Q6ZRF8 634 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 CABP7Q86V35 215 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 SPATA20Q8TB22 786 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 PAGR1Q9BTK6 254 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 COL20A1Q9P218 1284 aa13.57□□□□□ -0.24
USF1-203ENST00000368021 PP2D1A8MPX8 630 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 STAT6P42226 847 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 SETQ01105 290 aaPredicted RBP13.56□□□□□ -0.24
USF1-203ENST00000368021 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
USF1-203ENST00000368021 UVSSAQ2YD98 709 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 CEP55Q53EZ4 464 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 CHST13Q8NET6 341 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 ERCC4Q92889 916 aaPredicted RBP13.56□□□□□ -0.24
USF1-203ENST00000368021 PAGE5Q96GU1 130 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 MMTAG2Q9BU76 263 aaKnown RBP13.56□□□□□ -0.24
USF1-203ENST00000368021 ACAD9Q9H845 621 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 MAGEF1Q9HAY2 307 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 TRIM17Q9Y577 477 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 PCDHA5Q9Y5H7 936 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 ADGRA2Q96PE1 1338 aa13.56□□□□□ -0.24
USF1-203ENST00000368021 ZNF500O60304 480 aaPredicted RBP13.55□□□□□ -0.24
USF1-203ENST00000368021 MYL1P05976 194 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 BCRP11274 1271 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 CDK11BP21127 795 aaKnown RBP13.55□□□□□ -0.24
USF1-203ENST00000368021 BRD2P25440 801 aaKnown RBP13.55□□□□□ -0.24
USF1-203ENST00000368021 SARSP49591 514 aaKnown RBP13.55□□□□□ -0.24
USF1-203ENST00000368021 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
USF1-203ENST00000368021 NAALADL2Q58DX5 795 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 RRAGBQ5VZM2 374 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 NIPA1Q7RTP0 329 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 RNF214Q8ND24 703 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 CALML4Q96GE6 196 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 TSPYL1Q9H0U9 437 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 TXNRD2Q9NNW7 524 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 STK24Q9Y6E0 443 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 POTEMA6NI47 508 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 MEIS1O00470 390 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 MSH4O15457 936 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 SMC2O95347 1197 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 CTGFP29279 349 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 PSMC4P43686 418 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 NLRP12P59046 1061 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 KIF22Q14807 665 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 KRT79Q5XKE5 535 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 XRRA1Q6P2D8 792 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms