RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 RHDQ02161 417 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 STK3Q13188 491 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ZNF174Q15697 407 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CLUL1Q15846 466 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CRY1Q16526 586 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ALFQ53S48 1182 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CREB3L3Q68CJ9 461 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 C1orf228Q6PIY5 440 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CHSY3Q70JA7 882 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SRLQ86TD4 932 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ZNF354CQ86Y25 554 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 KSR1Q8IVT5 923 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TEX19Q8NA77 164 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ENOX1Q8TC92 643 aaKnown RBP4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LMBR1Q8WVP7 490 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SCLT1Q96NL6 688 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FAM193BQ96PV7 902 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TAAR9Q96RI9 348 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MCMBPQ9BTE3 642 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 BOCQ9BWV1 1114 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CSRNP2Q9H175 543 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FAM204AQ9H8W3 233 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 NGRNQ9NPE2 291 aaKnown RBP4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FAM105AQ9NUU6 356 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LUZP4Q9P127 313 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TMEFF2Q9UIK5 374 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GTF2A1LQ9UNN4 478 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LZTS1Q9Y250 596 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SPO11Q9Y5K1 396 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ACTL7BQ9Y614 415 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ABHD14A-ACY1A0A1B0GW23 586 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ARNTLO00327 626 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 DLL1O00548 723 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LRRN2O75325 713 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ZRANB2O95218 330 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PRAMEF1O95521 474 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 HRGP04196 525 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 DRD2P14416 443 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 NID1P14543 1247 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 IREB2P48200 963 aaKnown RBP4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LMOD3Q0VAK6 560 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ACAP2Q15057 778 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ATAT1Q5SQI0 421 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FDX2Q6P4F2 183 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TTLL7Q6ZT98 887 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 KIAA1211Q6ZU35 1233 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ACAD11Q709F0 780 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TMC3Q7Z5M5 1100 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FBXO11Q86XK2 927 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MIER2Q8N344 545 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ZNF610Q8N9Z0 462 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 C2CD4AQ8NCU7 369 aaPredicted RBP4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 VPS37AQ8NEZ2 397 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PARD3BQ8TEW8 1205 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 EDARADDQ8WWZ3 215 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TEKT5Q96M29 485 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FCRL3Q96P31 734 aaPredicted RBP4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MMP19Q99542 508 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 NAA15Q9BXJ9 866 aaKnown RBP4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 IPPKQ9H8X2 491 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PRDM10Q9NQV6 1147 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 H2AFY2Q9P0M6 372 aaPredicted RBP4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 DNM3Q9UQ16 869 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 DMTF1Q9Y222 760 aa4.61□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SLC12A8A0AV02 714 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TPP1O14773 563 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MAFGO15525 162 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 H2AFYO75367 372 aaKnown RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LCP1P13796 627 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PLS3P13797 630 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GRK3P35626 688 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ALDH5A1P51649 535 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ADKP55263 362 aaKnown RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SMAD3P84022 425 aaKnown RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 NMIQ13287 307 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SMAD2Q15796 467 aaKnown RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TRAPPC3LQ5T215 181 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 EEF1DP3Q658K8 133 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ANKRD34AQ69YU3 496 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 RCSD1Q6JBY9 416 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FRMD7Q6ZUT3 714 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MYLK4Q86YV6 388 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CCDC103Q8IW40 242 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 RCBTB1Q8NDN9 531 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ATXN2LQ8WWM7 1075 aaKnown RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 BTBD6Q96KE9 485 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ACAP3Q96P50 834 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PSMG3-AS1Q96PY0 264 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ZDHHC5Q9C0B5 715 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ACSS3Q9H6R3 686 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TOPORSQ9NS56 1045 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CATSPERZQ9NTU4 200 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MAP3K20Q9NYL2 800 aaKnown RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CLEC1BQ9P126 229 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GTF2IRD1Q9UHL9 959 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TPX2Q9ULW0 747 aaKnown RBP4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SCINQ9Y6U3 715 aa4.6□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SHISA8B8ZZ34 492 aa4.59□□□□□ -1.67
RNU6-1249P-201ENST00000363237 F5H423 210 aaPredicted RBP4.59□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MEIS1O00470 390 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms