RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 SYNDIG1Q9H7V2 258 aa22.08■■□□□ 1.12
CDC42BPB-201ENST00000361246 USP17L5A8MUK1 530 aa22.08■■□□□ 1.12
CDC42BPB-201ENST00000361246 PFKFB2O60825 505 aa22.08■■□□□ 1.12
CDC42BPB-201ENST00000361246 KCTD6Q8NC69 237 aa22.08■■□□□ 1.12
CDC42BPB-201ENST00000361246 HEG1Q9ULI3 1381 aa22.08■■□□□ 1.12
CDC42BPB-201ENST00000361246 FAM135BQ49AJ0 1406 aa22.08■■□□□ 1.12
CDC42BPB-201ENST00000361246 RASGRF1Q13972 1273 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 ZWILCHQ9H900 591 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 GFPT2O94808 682 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 KRT71Q3SY84 523 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 CALN1Q9BXU9 219 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 PCDHA7Q9UN72 937 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 HEXIM1O94992 359 aaKnown RBP22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 CFAP36Q96G28 342 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 KRBA2Q6ZNG9 492 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 EXT2Q93063 718 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 COA1Q9GZY4 146 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 HACD3Q9P035 362 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 ZSWIM5Q9P217 1185 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 FOSP01100 380 aaPredicted RBP22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 PKP1Q13835 747 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 UBE3CQ15386 1083 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 TRIP13Q15645 432 aaPredicted RBP22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 AFG1LQ8WV93 481 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 IPO11Q9UI26 975 aaKnown RBP22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 KDM5CP41229 1560 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 MSTO1Q9BUK6 570 aa22.07■■□□□ 1.12
CDC42BPB-201ENST00000361246 PSMC2P35998 433 aaKnown RBP22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 POLR2BP30876 1174 aaKnown RBP22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 GPSM2P81274 684 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 ZNF467Q7Z7K2 595 aaPredicted RBP22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 PLEKHA8P1O95397 391 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 ATF2P15336 505 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 CACNB2Q08289 660 aaPredicted RBP22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 TTC19Q6DKK2 380 aaPredicted RBP22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 JADE1Q6IE81 842 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 SLC44A5Q8NCS7 719 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 PLEKHG1Q9ULL1 1385 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 SPP2Q13103 211 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 SMAD1Q15797 465 aaKnown RBP22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 FAM186BQ8IYM0 893 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 ELMOD1Q8N336 334 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 PPP1R12CQ9BZL4 782 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 KIAA1468Q9P260 1216 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 MYO1EQ12965 1108 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 ARFGAP2Q8N6H7 521 aa22.06■■□□□ 1.12
CDC42BPB-201ENST00000361246 MAPK4P31152 587 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 RHPN2Q8IUC4 686 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 OSBP2Q969R2 916 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 AIFM3Q96NN9 605 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 DHX36Q9H2U1 1008 aaKnown RBP22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 ARHGAP42A6NI28 874 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 CIAO1O76071 339 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 C10orf67Q8IYJ2 551 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 ATG3Q9NT62 314 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 PRDX5P30044 214 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 HP1BP3Q5SSJ5 553 aaPredicted RBP22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 MCTP2Q6DN12 878 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 GNL1P36915 607 aaPredicted RBP22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 ZMYM1Q5SVZ6 1142 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 DPYSL4O14531 572 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 FAM8A1Q9UBU6 413 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 KDM5DQ9BY66 1539 aa22.05■■□□□ 1.12
CDC42BPB-201ENST00000361246 PHBP35232 272 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 PASD1Q8IV76 773 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 EHHADHQ08426 723 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 MAIP1Q8WWC4 291 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 GTPBP6O43824 516 aaPredicted RBP22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 ZSWIM6Q9HCJ5 1215 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 LONP1P36776 959 aaKnown RBP22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 SEPT2Q15019 361 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 RMDN3Q96TC7 470 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 PFDN6O15212 129 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 STX2P32856 288 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 CTNNA1P35221 906 aaKnown RBP22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 SOX5P35711 763 aa22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 BSDC1Q9NW68 430 aaPredicted RBP22.04■■□□□ 1.12
CDC42BPB-201ENST00000361246 NDUFAB1O14561 156 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 RGS16O15492 202 aaPredicted RBP22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 RAB17Q9H0T7 212 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 PLCB1Q9NQ66 1216 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 ZNF157P51786 506 aaPredicted RBP22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 IQCB1Q15051 598 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 FAM133AQ8N9E0 248 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 MXD3Q9BW11 206 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 ENC1O14682 589 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 MTMR1Q13613 665 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 TMEM106CQ9BVX2 250 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 ADGRL3Q9HAR2 1447 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 ABCC4O15439 1325 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 SYNDIG1LA6NDD5 238 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 CXCR5P32302 372 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 PAK2Q13177 524 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 ACCSLQ4AC99 568 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 GALNT17Q6IS24 598 aa22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 DARS2Q6PI48 645 aaKnown RBP22.03■■□□□ 1.12
CDC42BPB-201ENST00000361246 GCNT4Q9P109 453 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms