RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 BCRP11274 1271 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 HUNKP57058 714 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 DPCR1Q3MIW9 517 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 SMARCE1Q969G3 411 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 CBX8Q9HC52 389 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 PNMA3Q9UL41 463 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 SLC45A1Q9Y2W3 748 aa26.07■■□□□ 1.76
SDF4-202ENST00000360001 BTBD19C9JJ37 291 aa26.06■■□□□ 1.76
SDF4-202ENST00000360001 KBTBD4Q9NVX7 518 aa26.06■■□□□ 1.76
SDF4-202ENST00000360001 MAN1B1Q9UKM7 699 aa26.06■■□□□ 1.76
SDF4-202ENST00000360001 PSMD10O75832 226 aa26.06■■□□□ 1.76
SDF4-202ENST00000360001 ZNF165P49910 485 aa26.06■■□□□ 1.76
SDF4-202ENST00000360001 ISM2Q6H9L7 571 aa26.06■■□□□ 1.76
SDF4-202ENST00000360001 MAGEF1Q9HAY2 307 aa26.06■■□□□ 1.76
SDF4-202ENST00000360001 PDHXO00330 501 aa26.05■■□□□ 1.76
SDF4-202ENST00000360001 SMC2O95347 1197 aa26.05■■□□□ 1.76
SDF4-202ENST00000360001 CYP2C8P10632 490 aa26.05■■□□□ 1.76
SDF4-202ENST00000360001 ECM1Q16610 540 aa26.05■■□□□ 1.76
SDF4-202ENST00000360001 TMEM119Q4V9L6 283 aa26.05■■□□□ 1.76
SDF4-202ENST00000360001 HYIQ5T013 277 aa26.05■■□□□ 1.76
SDF4-202ENST00000360001 NCAPG2Q86XI2 1143 aa26.05■■□□□ 1.76
SDF4-202ENST00000360001 WDR11Q9BZH6 1224 aa26.05■■□□□ 1.76
SDF4-202ENST00000360001 GTPBP6O43824 516 aaPredicted RBP26.04■■□□□ 1.76
SDF4-202ENST00000360001 MYCLP12524 364 aaPredicted RBP26.04■■□□□ 1.76
SDF4-202ENST00000360001 Q3C1V9 767 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 NCAPH2Q6IBW4 605 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 XRRA1Q6P2D8 792 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 ANKRD23Q86SG2 305 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 ANKRD35Q8N283 1001 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 NSUN6Q8TEA1 469 aaKnown RBP26.04■■□□□ 1.76
SDF4-202ENST00000360001 CDK5RAP3Q96JB5 506 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 ZNF577Q9BSK1 485 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 JADE2Q9NQC1 790 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 BLOC1S4Q9NUP1 217 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 SLC25A27O95847 323 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 BMP6P22004 513 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 CUL4BQ13620 913 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 UVSSAQ2YD98 709 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 LRCH2Q5VUJ6 765 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 VSIG10LQ86VR7 867 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 BLZF1Q9H2G9 400 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 R3HDMLQ9H3Y0 253 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 KCNH7Q9NS40 1196 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 STK17AQ9UEE5 414 aa26.04■■□□□ 1.76
SDF4-202ENST00000360001 PFASO15067 1338 aa26.03■■□□□ 1.76
SDF4-202ENST00000360001 PASKQ96RG2 1323 aa26.03■■□□□ 1.76
SDF4-202ENST00000360001 SLC26A4O43511 780 aa26.03■■□□□ 1.76
SDF4-202ENST00000360001 NR3C2P08235 984 aa26.03■■□□□ 1.76
SDF4-202ENST00000360001 ERCC3P19447 782 aa26.03■■□□□ 1.76
SDF4-202ENST00000360001 CCT6AP40227 531 aaKnown RBP26.03■■□□□ 1.76
SDF4-202ENST00000360001 OTOP1Q7RTM1 612 aa26.03■■□□□ 1.76
SDF4-202ENST00000360001 KDM3AQ9Y4C1 1321 aa26.03■■□□□ 1.76
SDF4-202ENST00000360001 IPO5O00410 1097 aaKnown RBP26.02■■□□□ 1.76
SDF4-202ENST00000360001 CCND2P30279 289 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 MORC3Q14149 939 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.02■■□□□ 1.761e-11■■■□□ 18.6
SDF4-202ENST00000360001 LUZP1Q86V48 1076 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 TRIML1Q8N9V2 468 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 GTF3C2Q8WUA4 911 aaPredicted RBP26.02■■□□□ 1.76
SDF4-202ENST00000360001 GSDMAQ96QA5 445 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 COPB2P35606 906 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 PPP2R5CQ13362 524 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 IQCB1Q15051 598 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 KCNK18Q7Z418 384 aa26.02■■□□□ 1.76
SDF4-202ENST00000360001 GPBP1L1Q9HC44 474 aaPredicted RBP26.02■■□□□ 1.76
SDF4-202ENST00000360001 EML1O00423 815 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 GAS7O60861 476 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 ERVK-9P63128 1117 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 ERVK-24P63145 666 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 MTMR1Q13613 665 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 HAUS3Q68CZ6 603 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 FAM43AQ8N2R8 423 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 ERMNQ8TAM6 284 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 RIT2Q99578 217 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 PTPN18Q99952 460 aa26.01■■□□□ 1.75
SDF4-202ENST00000360001 AGO4Q9HCK5 861 aaKnown RBP26.01■■□□□ 1.75
SDF4-202ENST00000360001 ASTN1O14525 1302 aa26■■□□□ 1.75
SDF4-202ENST00000360001 MED24O75448 989 aa26■■□□□ 1.75
SDF4-202ENST00000360001 MYL1P05976 194 aa26■■□□□ 1.75
SDF4-202ENST00000360001 CNTN2Q02246 1040 aa26■■□□□ 1.75
SDF4-202ENST00000360001 B3GNT9Q6UX72 402 aa26■■□□□ 1.75
SDF4-202ENST00000360001 SAPCD2Q86UD0 394 aa26■■□□□ 1.75
SDF4-202ENST00000360001 RASAL3Q86YV0 1011 aa26■■□□□ 1.75
SDF4-202ENST00000360001 NAT10Q9H0A0 1025 aaKnown RBP26■■□□□ 1.75
SDF4-202ENST00000360001 NT5C3AQ9H0P0 336 aa26■■□□□ 1.75
SDF4-202ENST00000360001 STK24Q9Y6E0 443 aa26■■□□□ 1.75
SDF4-202ENST00000360001 POTEB3A0JP26 581 aa26■■□□□ 1.75
SDF4-202ENST00000360001 POTEBQ6S5H4 581 aa26■■□□□ 1.75
SDF4-202ENST00000360001 DNERQ8NFT8 737 aa26■■□□□ 1.75
SDF4-202ENST00000360001 SMCR8Q8TEV9 937 aaPredicted RBP26■■□□□ 1.75
SDF4-202ENST00000360001 RAD54LQ92698 747 aa26■■□□□ 1.75
SDF4-202ENST00000360001 SPATA31C1P0DKV0 1188 aa25.99■■□□□ 1.75
SDF4-202ENST00000360001 RPA1P27694 616 aa25.99■■□□□ 1.75
SDF4-202ENST00000360001 ZNF157P51786 506 aaPredicted RBP25.99■■□□□ 1.75
SDF4-202ENST00000360001 CATSPER3Q86XQ3 398 aa25.99■■□□□ 1.75
SDF4-202ENST00000360001 LARP4BQ92615 738 aaKnown RBP25.99■■□□□ 1.75
SDF4-202ENST00000360001 BPIFA3Q9BQP9 254 aa25.99■■□□□ 1.75
SDF4-202ENST00000360001 TEKT3Q9BXF9 490 aa25.99■■□□□ 1.75
SDF4-202ENST00000360001 KIF3CO14782 793 aa25.98■■□□□ 1.75
SDF4-202ENST00000360001 DHX15O43143 795 aaKnown RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms