RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ORC6Q9Y5N6 252 aa25.05■■□□□ 1.6
NPAS3-201ENST00000346562 ANKRD20A4Q4UJ75 823 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 ANKRD20A8PQ5CZ79 823 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 ANKRD20A2Q5SQ80 823 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 ANKRD20A1Q5TYW2 823 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 SPDL1Q96EA4 605 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 NFKBIAP25963 317 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 DNAJC24Q6P3W2 148 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 DNAAF3Q8N9W5 541 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 MRFAP1L1Q96HT8 127 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 MTMR6Q9Y217 621 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 A0A1W2PQ27 194 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 A0A1W2PQ64 194 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 A0A1W2PQD8 194 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 TFAMQ00059 246 aaKnown RBP25.04■■□□□ 1.6
NPAS3-201ENST00000346562 ARMCX2Q7L311 632 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 P2RX5Q93086 422 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 SCRN1Q12765 414 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 UHMK1Q8TAS1 419 aaKnown RBP25.04■■□□□ 1.6
NPAS3-201ENST00000346562 COPRSQ9NQ92 184 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 NVLO15381 856 aaKnown RBP25.04■■□□□ 1.6
NPAS3-201ENST00000346562 ZMYM1Q5SVZ6 1142 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 FAM160B2Q86V87 743 aa25.04■■□□□ 1.6
NPAS3-201ENST00000346562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.04■■□□□ 1.6
NPAS3-201ENST00000346562 DTNBO60941 627 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 MYL1P05976 194 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 DBNDD1Q9H9R9 158 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 KCTD6Q8NC69 237 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 GSTA4O15217 222 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 EVI5O60447 810 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 ADORA1P30542 326 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 ZBTB33Q86T24 672 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 RNF139Q8WU17 664 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 MAGOHBQ96A72 148 aaKnown RBP25.03■■□□□ 1.6
NPAS3-201ENST00000346562 TACO1Q9BSH4 297 aaKnown RBP25.03■■□□□ 1.6
NPAS3-201ENST00000346562 EPS15L1Q9UBC2 864 aa25.03■■□□□ 1.6
NPAS3-201ENST00000346562 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 SLC4A1P02730 911 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 ELF1P32519 619 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 NAA35Q5VZE5 725 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 DARS2Q6PI48 645 aaKnown RBP25.02■■□□□ 1.6
NPAS3-201ENST00000346562 PTPRTO14522 1441 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 GOLGA8SH3BPF8 625 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 ATP1A2P50993 1020 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 GUCY2DQ02846 1103 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 ALCAMQ13740 583 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 ERFEQ4G0M1 354 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 JRKLQ9Y4A0 524 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 GNGT2O14610 69 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 MSH2P43246 934 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 SEPT2Q15019 361 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 SGO2Q562F6 1265 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 M0R2C6 588 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 ECEL1O95672 775 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 PIGSQ96S52 555 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 TLK1Q9UKI8 766 aa25.02■■□□□ 1.6
NPAS3-201ENST00000346562 GSPT1P15170 499 aaKnown RBP25.01■■□□□ 1.59
NPAS3-201ENST00000346562 MAN2A1Q16706 1144 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.01■■□□□ 1.59
NPAS3-201ENST00000346562 MED4Q9NPJ6 270 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 PNMA3Q9UL41 463 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 PPARGP37231 505 aaPredicted RBP25.01■■□□□ 1.59
NPAS3-201ENST00000346562 ARL13BQ3SXY8 428 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 TBCKQ8TEA7 893 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 EPHB1P54762 984 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 ZNF658Q5TYW1 1059 aaPredicted RBP25.01■■□□□ 1.59
NPAS3-201ENST00000346562 NDUFAF2Q8N183 169 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 PGBD1Q96JS3 809 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 TMEM63CQ9P1W3 806 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 SERPINB13Q9UIV8 391 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 OR6B2Q6IFH4 312 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 ABT1Q9ULW3 272 aaKnown RBP25.01■■□□□ 1.59
NPAS3-201ENST00000346562 CAPN7Q9Y6W3 813 aa25.01■■□□□ 1.59
NPAS3-201ENST00000346562 PRPSAP2O60256 369 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 PHEXP78562 749 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 MTERF2Q49AM1 385 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 LRRC8AQ8IWT6 810 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 SRRM1Q8IYB3 904 aaKnown RBP25■■□□□ 1.59
NPAS3-201ENST00000346562 CIITAP33076 1130 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 DALRD3Q5D0E6 543 aaKnown RBP25■■□□□ 1.59
NPAS3-201ENST00000346562 PCIF1Q9H4Z3 704 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 RPF1Q9H9Y2 349 aaKnown RBP25■■□□□ 1.59
NPAS3-201ENST00000346562 NUDCD1Q96RS6 583 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 SUN1O94901 812 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 C7orf31Q8N865 590 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 PI4KBQ9UBF8 816 aa25■■□□□ 1.59
NPAS3-201ENST00000346562 SLC16A2P36021 539 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 TMTC3Q6ZXV5 915 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 CASP14P31944 242 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 FBXO18Q8NFZ0 1043 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 CARMIL3Q8ND23 1372 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 CDC25BP30305 580 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 DYNLL1P63167 89 aaKnown RBP24.99■■□□□ 1.59
NPAS3-201ENST00000346562 SLC39A14Q15043 492 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 TSPYL2Q9H2G4 693 aaPredicted RBP24.99■■□□□ 1.59
NPAS3-201ENST00000346562 PZPP20742 1482 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 RNF123Q5XPI4 1314 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 C10orf76Q5T2E6 689 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 RTKN2Q8IZC4 609 aa24.99■■□□□ 1.59
NPAS3-201ENST00000346562 GDAP1Q8TB36 358 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms