RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 P2RX5Q93086 422 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 BAG1Q99933 345 aaPredicted RBP20.76■□□□□ 0.91
HOXA9-201ENST00000343483 SRRTQ9BXP5 876 aaKnown RBP20.76■□□□□ 0.91
HOXA9-201ENST00000343483 LRRC10BA6NIK2 292 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 E9PMD0 336 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 MSH4O15457 936 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 TUBB4AP04350 444 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 CYP3A4P08684 503 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 COPB1P53618 953 aaKnown RBP20.75■□□□□ 0.91
HOXA9-201ENST00000343483 SPIRE1Q08AE8 756 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 HAUS3Q68CZ6 603 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 SYT10Q6XYQ8 523 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 IRF2BP1Q8IU81 584 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 CSGALNACT2Q8N6G5 542 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 TC2NQ8N9U0 490 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 LPAR1Q92633 364 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 FAM20AQ96MK3 541 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 KIAA1683Q9H0B3 1180 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 NMRK2Q9NPI5 230 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 CCPG1Q9ULG6 757 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 ABCB11O95342 1321 aa20.75■□□□□ 0.91
HOXA9-201ENST00000343483 BICDL2A1A5D9 508 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 WDR46O15213 610 aaKnown RBP20.74■□□□□ 0.91
HOXA9-201ENST00000343483 CCNE1P24864 410 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 PPP1R2P41236 205 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 UBXN2AP68543 259 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 ANGEL2Q5VTE6 544 aaKnown RBP20.74■□□□□ 0.91
HOXA9-201ENST00000343483 TEX2Q8IWB9 1127 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 AGBL1Q96MI9 1066 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 SLF1Q9BQI6 1058 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 TANGO6Q9C0B7 1094 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 THAP9Q9H5L6 903 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 MED24O75448 989 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 PBX1P40424 430 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 MTMR2Q13614 643 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 PRAMEF18Q5VWM3 479 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 PPFIBP1Q86W92 1011 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 PRPF38AQ8NAV1 312 aaKnown RBP20.74■□□□□ 0.91
HOXA9-201ENST00000343483 ERMNQ8TAM6 284 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 EEF2KMTQ96G04 330 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 ARID3AQ99856 593 aa20.74■□□□□ 0.91
HOXA9-201ENST00000343483 MAGEC2Q9UBF1 373 aaPredicted RBP20.74■□□□□ 0.91
HOXA9-201ENST00000343483 POTEFA5A3E0 1075 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 ICAM1P05362 532 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 POTEIP0CG38 1075 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 DCAF15Q66K64 600 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 ANKRD40Q6AI12 368 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 POTEGQ6S5H5 508 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 POTEEQ6S8J3 1075 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 PDCL2Q8N4E4 241 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 DUSP9Q99956 384 aaKnown RBP20.73■□□□□ 0.91
HOXA9-201ENST00000343483 GINM1Q9NU53 330 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 ZSCAN12O43309 604 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 STX10O60499 249 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 PLA2G4BP0C869 781 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 CPLX3Q8WVH0 158 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 HOOK2Q96ED9 719 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 EHMT1Q9H9B1 1298 aa20.73■□□□□ 0.91
HOXA9-201ENST00000343483 BMP2KQ9NSY1 1161 aaPredicted RBP20.73■□□□□ 0.91
HOXA9-201ENST00000343483 ATAD5Q96QE3 1844 aa20.72■□□□□ 0.91
HOXA9-201ENST00000343483 IGLV3-22A0A075B6J6 115 aa20.72■□□□□ 0.91
HOXA9-201ENST00000343483 GLTPD2A6NH11 291 aa20.72■□□□□ 0.91
HOXA9-201ENST00000343483 AKR1B15C9JRZ8 316 aaPredicted RBP20.72■□□□□ 0.91
HOXA9-201ENST00000343483 SLC26A4O43511 780 aa20.72■□□□□ 0.91
HOXA9-201ENST00000343483 EEF1GP26641 437 aaKnown RBP20.72■□□□□ 0.91
HOXA9-201ENST00000343483 RBL2Q08999 1139 aa20.72■□□□□ 0.91
HOXA9-201ENST00000343483 COBLL1Q53SF7 1204 aa20.72■□□□□ 0.91
HOXA9-201ENST00000343483 CATSPER3Q86XQ3 398 aa20.72■□□□□ 0.91
HOXA9-201ENST00000343483 TRPM4Q8TD43 1214 aa20.72■□□□□ 0.91
HOXA9-201ENST00000343483 NOC3LQ8WTT2 800 aaKnown RBP20.72■□□□□ 0.91
HOXA9-201ENST00000343483 ZNF215Q9UL58 517 aaPredicted RBP20.72■□□□□ 0.91
HOXA9-201ENST00000343483 SMCHD1A6NHR9 2005 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 PES1O00541 588 aaKnown RBP20.71■□□□□ 0.91
HOXA9-201ENST00000343483 FLOT1O75955 427 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 NAA30Q147X3 362 aaPredicted RBP20.71■□□□□ 0.91
HOXA9-201ENST00000343483 GPBP1Q86WP2 473 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 REXO1L1PQ8IX06 675 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 CPXCR1Q8N123 301 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 DNAJC19Q96DA6 116 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 WDR18Q9BV38 432 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 GPBP1L1Q9HC44 474 aaPredicted RBP20.71■□□□□ 0.91
HOXA9-201ENST00000343483 VAV3Q9UKW4 847 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 PPP2R2CQ9Y2T4 447 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 ZNF536O15090 1300 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 MEIS1O00470 390 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 VCAM1P19320 739 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 ETF1P62495 437 aaKnown RBP20.71■□□□□ 0.91
HOXA9-201ENST00000343483 UBXN1Q04323 297 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 APOBEC3FQ8IUX4 373 aaKnown RBP20.71■□□□□ 0.91
HOXA9-201ENST00000343483 WRNIP1Q96S55 665 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 RRAGCQ9HB90 399 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 GPRC5DQ9NZD1 345 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 FZD1Q9UP38 647 aa20.71■□□□□ 0.91
HOXA9-201ENST00000343483 COASYQ13057 564 aa20.7■□□□□ 0.9
HOXA9-201ENST00000343483 SPP2Q13103 211 aa20.7■□□□□ 0.9
HOXA9-201ENST00000343483 ZKSCAN4Q969J2 545 aaPredicted RBP20.7■□□□□ 0.9
HOXA9-201ENST00000343483 ZFP91Q96JP5 570 aaPredicted RBP20.7■□□□□ 0.9
HOXA9-201ENST00000343483 SEMA6BQ9H3T3 888 aa20.7■□□□□ 0.9
HOXA9-201ENST00000343483 PANK4Q9NVE7 773 aa20.7■□□□□ 0.9
HOXA9-201ENST00000343483 ITIH6Q6UXX5 1313 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms