RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 PPM1EQ8WY54 764 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 RABGGTAQ92696 567 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 PANX2Q96RD6 677 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 MMS19Q96T76 1030 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 TMEM206Q9H813 350 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 VPS37BQ9H9H4 285 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 C21orf2O43822 256 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 SEPT14Q6ZU15 432 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 HACE1Q8IYU2 909 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 PCIF1Q9H4Z3 704 aa21.08■□□□□ 0.96
SH2B3-201ENST00000341259 ZBTB5O15062 677 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 EXOSC10Q01780 885 aaKnown RBP21.07■□□□□ 0.96
SH2B3-201ENST00000341259 CIAPIN1Q6FI81 312 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 SUPT20HL1Q3ZLR7 823 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 NSFP46459 744 aaKnown RBP21.07■□□□□ 0.96
SH2B3-201ENST00000341259 ZBED6P86452 979 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 AP3B2Q13367 1082 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 GDAQ9Y2T3 454 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 SGMS1Q86VZ5 419 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 CCDC117Q8IWD4 279 aaPredicted RBP21.07■□□□□ 0.96
SH2B3-201ENST00000341259 RSAD2Q8WXG1 361 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 NHEJ1Q9H9Q4 299 aaPredicted RBP21.07■□□□□ 0.96
SH2B3-201ENST00000341259 PARVGQ9HBI0 331 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 DALRD3Q5D0E6 543 aaKnown RBP21.07■□□□□ 0.96
SH2B3-201ENST00000341259 CEP85LQ5SZL2 805 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 HHATQ5VTY9 493 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 CEP95Q96GE4 821 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 CEP170P1Q96L14 293 aa21.07■□□□□ 0.96
SH2B3-201ENST00000341259 PREX1Q8TCU6 1659 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 KRT15P19012 456 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 TFDP1Q14186 410 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 HADHQ16836 314 aaKnown RBP21.06■□□□□ 0.96
SH2B3-201ENST00000341259 CEP57Q86XR8 500 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 FAM133AQ8N9E0 248 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 ECE2O60344 883 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 IRX5P78411 483 aaPredicted RBP21.06■□□□□ 0.96
SH2B3-201ENST00000341259 PTK2Q05397 1052 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 LRRC63Q05C16 580 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 CTTNQ14247 550 aaKnown RBP21.06■□□□□ 0.96
SH2B3-201ENST00000341259 GPR162Q16538 588 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 MB21D1Q8N884 522 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 KIF28PB7ZC32 967 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 SLC7A3Q8WY07 619 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 ADCY8P40145 1251 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 GCNT4Q9P109 453 aa21.06■□□□□ 0.96
SH2B3-201ENST00000341259 TMOD1P28289 359 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 KRT81Q14533 505 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 NDST4Q9H3R1 872 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 GOLGA8KD6RF30 607 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 RGS16O15492 202 aaPredicted RBP21.05■□□□□ 0.96
SH2B3-201ENST00000341259 CASP1P29466 404 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 ZNF34Q8IZ26 560 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 BPIFA3Q9BQP9 254 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 PCDHA6Q9UN73 950 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 PCDHA8Q9Y5H6 950 aa21.05■□□□□ 0.96
SH2B3-201ENST00000341259 IFNB1P01574 187 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 ATF7P17544 494 aaPredicted RBP21.04■□□□□ 0.96
SH2B3-201ENST00000341259 BPIFB4P59827 614 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 SLC27A3Q5K4L6 730 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 CCDC170Q8IYT3 715 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 CDHR1Q96JP9 859 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 ZNF341Q9BYN7 854 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 ADD3Q9UEY8 706 aaKnown RBP21.04■□□□□ 0.96
SH2B3-201ENST00000341259 DIP2BQ9P265 1576 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 ORC4O43929 436 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 EIF4A3P38919 411 aaKnown RBP21.04■□□□□ 0.96
SH2B3-201ENST00000341259 LACTBP83111 547 aaPredicted RBP21.04■□□□□ 0.96
SH2B3-201ENST00000341259 SCYL2Q6P3W7 929 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 PODNQ7Z5L7 613 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 KRT12Q99456 494 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 PCDHB4Q9Y5E5 795 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 CEMIPQ8WUJ3 1361 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 HINFPQ9BQA5 517 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 CSF1RP07333 972 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 CASC4Q6P4E1 433 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 SPC25Q9HBM1 224 aa21.04■□□□□ 0.96
SH2B3-201ENST00000341259 MESDQ14696 234 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 NFIXQ14938 502 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 LGSNQ5TDP6 509 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 NAA35Q5VZE5 725 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 MED10Q9BTT4 135 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 NDUFA10O95299 355 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 PRR29P0C7W0 189 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 OSBPP22059 807 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 GUCY2DQ02846 1103 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 PPP1R18Q6NYC8 613 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 UNC13DQ70J99 1090 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 TDRD3Q9H7E2 651 aaKnown RBP21.03■□□□□ 0.96
SH2B3-201ENST00000341259 POTEMA6NI47 508 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 MFAP3LO75121 409 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 LRRN2O75325 713 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 ARID5BQ14865 1188 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 FAM47CQ5HY64 1035 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 SPTLC3Q9NUV7 552 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.03■□□□□ 0.96
SH2B3-201ENST00000341259 MOCS3O95396 460 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 PDIA6Q15084 440 aa21.03■□□□□ 0.96
SH2B3-201ENST00000341259 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.03■□□□□ 0.96
SH2B3-201ENST00000341259 USP17L10C9JJH3 530 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms