RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 AGTPBP1Q9UPW5 1226 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 SPATA4Q8NEY3 305 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 AMFRQ9UKV5 643 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 USTQ9Y2C2 406 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 PCDHB6Q9Y5E3 794 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 STXBP3O00186 592 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 PCP11498 1178 aaKnown RBP17.48■□□□□ 0.39
NPHP3-201ENST00000337331 FERP16591 822 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
NPHP3-201ENST00000337331 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 CNOT6LQ96LI5 555 aaKnown RBP17.48■□□□□ 0.39
NPHP3-201ENST00000337331 A0A0U1RQJ8 604 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 SCTRP47872 440 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 KRT31Q15323 416 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 SMARCAL1Q9NZC9 954 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 EXOC7Q9UPT5 735 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 KDM3AQ9Y4C1 1321 aa17.48■□□□□ 0.39
NPHP3-201ENST00000337331 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 GAS7O60861 476 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 TRAPPC10P48553 1259 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 ATP8A1Q9Y2Q0 1164 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 ABCC3O15438 1527 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 LIFRP42702 1097 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 RASSF7Q02833 373 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 DDR1Q08345 913 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 PLCB4Q15147 1175 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 DENND2CQ68D51 928 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 NFRKBQ6P4R8 1299 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 OPHN1O60890 802 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 TRIM37O94972 964 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 ADAM9Q13443 819 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 LIN9Q5TKA1 542 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 NBPF10Q6P3W6 841 aaKnown RBP17.47■□□□□ 0.39
NPHP3-201ENST00000337331 TTC16Q8NEE8 873 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 STK24Q9Y6E0 443 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
NPHP3-201ENST00000337331 H2AFZP0C0S5 128 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 TMED1Q13445 227 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 H2AFVQ71UI9 128 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 MCUR1Q96AQ8 359 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 EPSTI1Q96J88 318 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 FGD4Q96M96 766 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 PANK4Q9NVE7 773 aa17.47■□□□□ 0.39
NPHP3-201ENST00000337331 LMTK3Q96Q04 1460 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 KRIT1O00522 736 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 BTDP43251 543 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 CYP4A11Q02928 519 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 TEKT1Q969V4 418 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 DMGDHQ9UI17 866 aaKnown RBP17.46■□□□□ 0.39
NPHP3-201ENST00000337331 CYP2D7A0A087X1C5 515 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 AARSP49588 968 aaKnown RBP eCLIP17.46■□□□□ 0.39
NPHP3-201ENST00000337331 HHATQ5VTY9 493 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 MAK16Q9BXY0 300 aaKnown RBP17.46■□□□□ 0.39
NPHP3-201ENST00000337331 MED14O60244 1454 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 ZNF804BA4D1E1 1349 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 H7C1W4 665 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 CRKLP46109 303 aaKnown RBP17.46■□□□□ 0.39
NPHP3-201ENST00000337331 DHX9Q08211 1270 aaKnown RBP17.46■□□□□ 0.39
NPHP3-201ENST00000337331 DCUN1D2Q6PH85 259 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.39
NPHP3-201ENST00000337331 SMCR8Q8TEV9 937 aaPredicted RBP17.46■□□□□ 0.39
NPHP3-201ENST00000337331 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
NPHP3-201ENST00000337331 NHEJ1Q9H9Q4 299 aaPredicted RBP17.46■□□□□ 0.39
NPHP3-201ENST00000337331 MMEP08473 750 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 RAD23BP54727 409 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 PPP2R2AP63151 447 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 SHC4Q6S5L8 630 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 TAOK1Q7L7X3 1001 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 ADAT2Q7Z6V5 191 aaKnown RBP17.45■□□□□ 0.38
NPHP3-201ENST00000337331 ZNF354CQ86Y25 554 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 PIH1D3Q9NQM4 214 aaKnown RBP17.45■□□□□ 0.38
NPHP3-201ENST00000337331 SCNN1DP51172 638 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 DYNC1I2Q13409 638 aaKnown RBP17.45■□□□□ 0.38
NPHP3-201ENST00000337331 CROCCP2Q86T23 111 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 KIF2BQ8N4N8 673 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 OR2W6PQ8NHA6 318 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 GJA10Q969M2 543 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 KIF1BO60333 1816 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 TXNDC9O14530 226 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 FTCDO95954 541 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 PECAM1P16284 738 aaPredicted RBP17.45■□□□□ 0.38
NPHP3-201ENST00000337331 SLCO1A2P46721 670 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 STRN3Q13033 797 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 FAM210AQ96ND0 272 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 RAB17Q9H0T7 212 aa17.45■□□□□ 0.38
NPHP3-201ENST00000337331 EEF1GP26641 437 aaKnown RBP17.44■□□□□ 0.38
NPHP3-201ENST00000337331 TRPC3Q13507 836 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 EZH2Q15910 746 aaKnown RBP17.44■□□□□ 0.38
NPHP3-201ENST00000337331 VPS52Q8N1B4 723 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 UBXN6Q9BZV1 441 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.44■□□□□ 0.384e-7■■■■■ 44
NPHP3-201ENST00000337331 DDX25Q9UHL0 483 aaKnown RBP17.44■□□□□ 0.38
NPHP3-201ENST00000337331 HEG1Q9ULI3 1381 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 SNAP23O00161 211 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 OPLAHO14841 1288 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 NCK2O43639 380 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 CD19P15391 556 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms