RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 C7orf31Q8N865 590 aa20.27■□□□□ 0.84
EXOSC4-201ENST00000316052 GPKOWQ92917 476 aaPredicted RBP eCLIP20.27■□□□□ 0.84
EXOSC4-201ENST00000316052 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.84
EXOSC4-201ENST00000316052 NBNO60934 754 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 BAIAP3O94812 1187 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 F2P00734 622 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 CKBP12277 381 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 MRPS5P82675 430 aaKnown RBP20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 RBL2Q08999 1139 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 TROAPQ12815 778 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 HSDL1Q3SXM5 330 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 CELF3Q5SZQ8 465 aaKnown RBP20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 LRRC8DQ7L1W4 858 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 SPRED2Q7Z698 418 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 TMCO2Q7Z6W1 182 aaPredicted RBP20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 WNT8BQ93098 351 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 BCAS3Q9H6U6 928 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 MTCH2Q9Y6C9 303 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 BRWD1Q9NSI6 2320 aa20.26■□□□□ 0.83
EXOSC4-201ENST00000316052 E7EWF7 191 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 GCOM1H8Y6P7 765 aaPredicted RBP20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 TNFRSF10AO00220 468 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 PPFIA4O75335 1185 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 POLR2MP0CAP2 368 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 POU3F3P20264 500 aaPredicted RBP20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 WDR5P61964 334 aaKnown RBP20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 TRIM71Q2Q1W2 868 aaKnown RBP20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 KRT40Q6A162 431 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 TRAF7Q6Q0C0 670 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 FCHSD1Q86WN1 690 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 SAMD3Q8N6K7 520 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 RUFY2Q8WXA3 655 aa20.25■□□□□ 0.83
EXOSC4-201ENST00000316052 PNMA6FA0A0J9YX94 578 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 GGPS1O95749 300 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 CXCL10P02778 98 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 ANTXR2P58335 489 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 PTK7Q13308 1070 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 WTAPQ15007 396 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 KCNV1Q6PIU1 500 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 ARNTL2Q8WYA1 636 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 SPATA33Q96N06 139 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 KATNAL1Q9BW62 490 aa20.24■□□□□ 0.83
EXOSC4-201ENST00000316052 LCHNA4D1U4 455 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 KIF28PB7ZC32 967 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 SGSM2O43147 1006 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 UBA1P22314 1058 aaKnown RBP20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 CCND2P30279 289 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 DEFB103AP81534 67 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 MBTPS1Q14703 1052 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 NCOA7Q8NI08 942 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 IGDCC4Q8TDY8 1250 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 ADAMTS19Q8TE59 1207 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 C16orf70Q9BSU1 422 aa20.23■□□□□ 0.83
EXOSC4-201ENST00000316052 ERICH2A1L162 156 aa20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 TLL1O43897 1013 aa20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 TGFB3P10600 412 aa20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 KCNJ6P48051 423 aa20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 IRX6P78412 446 aaPredicted RBP20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 TFF2Q03403 129 aa20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 ZNF618Q5T7W0 954 aa20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 CNKSR3Q6P9H4 555 aa20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 RALYLQ86SE5 291 aaKnown RBP20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 PIBF1Q8WXW3 757 aa20.22■□□□□ 0.83
EXOSC4-201ENST00000316052 PARNO95453 639 aaKnown RBP20.21■□□□□ 0.83
EXOSC4-201ENST00000316052 MRPS9P82933 396 aaKnown RBP20.21■□□□□ 0.83
EXOSC4-201ENST00000316052 TRAF1Q13077 416 aa20.21■□□□□ 0.83
EXOSC4-201ENST00000316052 MB21D2Q8IYB1 491 aaPredicted RBP20.21■□□□□ 0.83
EXOSC4-201ENST00000316052 MAP4K1Q92918 833 aa20.21■□□□□ 0.83
EXOSC4-201ENST00000316052 TSPYL2Q9H2G4 693 aaPredicted RBP20.21■□□□□ 0.83
EXOSC4-201ENST00000316052 DOCK5Q9H7D0 1870 aa20.21■□□□□ 0.83
EXOSC4-201ENST00000316052 GTPBP6O43824 516 aaPredicted RBP20.2■□□□□ 0.82
EXOSC4-201ENST00000316052 LPXNO60711 386 aa20.2■□□□□ 0.82
EXOSC4-201ENST00000316052 BMP1P13497 986 aa20.2■□□□□ 0.82
EXOSC4-201ENST00000316052 GRB10Q13322 594 aa20.2■□□□□ 0.82
EXOSC4-201ENST00000316052 SART3Q15020 963 aaKnown RBP20.2■□□□□ 0.82
EXOSC4-201ENST00000316052 CATIPQ7Z7H3 387 aa20.2■□□□□ 0.82
EXOSC4-201ENST00000316052 MLXIPQ9HAP2 919 aa20.2■□□□□ 0.82
EXOSC4-201ENST00000316052 ABHD14A-ACY1A0A1B0GW23 586 aa20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 SEMA3FQ13275 785 aa20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 SKIV2LQ15477 1246 aaKnown RBP20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 SERINC5Q86VE9 423 aa20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 NECAB3Q96P71 396 aaPredicted RBP20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 UHRF1Q96T88 793 aaPredicted RBP20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 ZBED2Q9BTP6 218 aa20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 MYL10Q9BUA6 226 aa20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 RTEL1Q9NZ71 1219 aa20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 TELO2Q9Y4R8 837 aa20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 FRMPD4Q14CM0 1322 aa20.19■□□□□ 0.82
EXOSC4-201ENST00000316052 H3BRB1 525 aa20.18■□□□□ 0.82
EXOSC4-201ENST00000316052 GJB5O95377 273 aa20.18■□□□□ 0.82
EXOSC4-201ENST00000316052 ICAM3P32942 547 aa20.18■□□□□ 0.82
EXOSC4-201ENST00000316052 INPP4AQ96PE3 977 aaPredicted RBP20.18■□□□□ 0.82
EXOSC4-201ENST00000316052 TUT1Q9H6E5 874 aaKnown RBP20.18■□□□□ 0.82
EXOSC4-201ENST00000316052 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
EXOSC4-201ENST00000316052 RBM8AQ9Y5S9 174 aaKnown RBP20.18■□□□□ 0.82
EXOSC4-201ENST00000316052 SPATA31C2B4DYI2 1134 aa20.17■□□□□ 0.82
EXOSC4-201ENST00000316052 LGALS2P05162 132 aa20.17■□□□□ 0.82
EXOSC4-201ENST00000316052 HOXC8P31273 242 aa20.17■□□□□ 0.82
EXOSC4-201ENST00000316052 THPOP40225 353 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms