RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 RPS6KB1P23443 525 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 DEUP1Q05D60 604 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 CTNNBL1Q8WYA6 563 aaPredicted RBP12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 RBM41Q96IZ5 413 aaKnown RBP12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 PFKFB1P16118 471 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 MDH1P40925 334 aaKnown RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 CCDC96Q2M329 555 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 TM6SF1Q9BZW5 370 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 PUS7LQ9H0K6 701 aaKnown RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 GCOM1H8Y6P7 765 aaPredicted RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 M0R2C6 588 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 SLC27A2O14975 620 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 KRT86O43790 486 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 MBD4O95243 580 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 FESP07332 822 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 MYZAPP0CAP1 466 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 LMNB1P20700 586 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 SESN3P58005 492 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 RNASE9P60153 205 aaKnown RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 GRIK5Q16478 980 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 ZNF589Q86UQ0 364 aaPredicted RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 FMR1NBQ8N0W7 255 aaPredicted RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 MAF1Q9H063 256 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 SUGT1Q9Y2Z0 365 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 A0A1B0GVG6 124 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 GPAA1O43292 621 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 CEP104O60308 925 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 IMPDH2P12268 514 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 KRT9P35527 623 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 IMMTQ16891 758 aaKnown RBP12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 RINLQ6ZS11 566 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 KLHL29Q96CT2 875 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 DLGAP2Q9P1A6 1054 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 BLOC1S6Q9UL45 172 aa12.82□□□□□ -0.36
LDLRAD3-201ENST00000315571 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 TCRBV5S4A2TA0A5A2 114 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 TSNAXIP1Q2TAA8 658 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 MAP7D1Q3KQU3 841 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 NCAPG2Q86XI2 1143 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 CERS5Q8N5B7 392 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 CCDC197Q8NCU1 140 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 RPGRIP1Q96KN7 1286 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 GGT7Q9UJ14 662 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 EPHB4P54760 987 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 MUM1Q2TAK8 710 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 ANKRD20A8PQ5CZ79 823 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 ALS2CLQ60I27 953 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 CDCA2Q69YH5 1023 aaPredicted RBP12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 TMEM154Q6P9G4 183 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 TMTC1Q8IUR5 882 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 SNRNP27Q8WVK2 155 aaKnown RBP12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 SEC16BQ96JE7 1060 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 PLEKHG4BQ96PX9 1271 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 PSMD14O00487 310 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 PAK2Q13177 524 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 TNIP1Q15025 636 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 Q4G0T1 1027 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 YTHDF3Q7Z739 585 aaKnown RBP12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 RNF10Q8N5U6 811 aaKnown RBP12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 YIPF2Q9BWQ6 316 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 NAA15Q9BXJ9 866 aaKnown RBP12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 ARMT1Q9H993 441 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 PAIP2BQ9ULR5 123 aaKnown RBP12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 GRIN2DO15399 1336 aa12.81□□□□□ -0.36
LDLRAD3-201ENST00000315571 TLDC2A0PJX2 215 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 DNM1LO00429 736 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 ZNF185O15231 689 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 SMNDC1O75940 238 aaKnown RBP eCLIP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 FKBP1AP62942 108 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 ELF3P78545 371 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 TMED1Q13445 227 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 KRT32Q14532 448 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 MAIP1Q8WWC4 291 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 SAMSN1Q9NSI8 373 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 GRIN3BO60391 1043 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 RNF8O76064 485 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 BAG3O95817 575 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 TMOD1P28289 359 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 SCNN1DP51172 638 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 CXCL9Q07325 125 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 VPS16Q9H269 839 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 VCX3BQ9H321 246 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 VCX3AQ9NNX9 186 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 TRIM10Q9UDY6 481 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 BZW2Q9Y6E2 419 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 MYH13Q9UKX3 1938 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 ATP2A2P16615 1042 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 GBP1P32455 592 aa12.8□□□□□ -0.36
LDLRAD3-201ENST00000315571 ST3GAL1Q11201 340 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms