RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 SLC4A7Q9Y6M7 1214 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 KIAA1217Q5T5P2 1943 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 IQCF3P0C7M6 154 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 HOXD8P13378 290 aaPredicted RBP21.02■□□□□ 0.96
TMEM88-201ENST00000301599 ICAM3P32942 547 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 MRPS9P82933 396 aaKnown RBP21.02■□□□□ 0.96
TMEM88-201ENST00000301599 EXOSC10Q01780 885 aaKnown RBP21.02■□□□□ 0.96
TMEM88-201ENST00000301599 KRT32Q14532 448 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 MFSD10Q14728 455 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 GDF6Q6KF10 455 aaPredicted RBP21.02■□□□□ 0.96
TMEM88-201ENST00000301599 XRRA1Q6P2D8 792 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 DEFB128Q7Z7B8 93 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 CCDC82Q8N4S0 544 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 CAGE1Q8TC20 777 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 VWCEQ96DN2 955 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 ALG1Q9BT22 464 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 PSTPIP2Q9H939 334 aa21.02■□□□□ 0.96
TMEM88-201ENST00000301599 COL6A3P12111 3177 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 SPATA31C2B4DYI2 1134 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 HAS3O00219 553 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 MEIS2O14770 477 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 SORBS3O60504 671 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 ACTN1P12814 892 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 UBA1P22314 1058 aaKnown RBP21.01■□□□□ 0.95
TMEM88-201ENST00000301599 PBX2P40425 430 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 NEDD9Q14511 834 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 GRIN2CQ14957 1233 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 KIAA0753Q2KHM9 967 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 HSDL1Q3SXM5 330 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 RAB11FIP4Q86YS3 637 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 INPP4AQ96PE3 977 aaPredicted RBP21.01■□□□□ 0.95
TMEM88-201ENST00000301599 RTEL1Q9NZ71 1219 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 HDAC6Q9UBN7 1215 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 GTF2IRD1Q9UHL9 959 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 FRMPD4Q14CM0 1322 aa21.01■□□□□ 0.95
TMEM88-201ENST00000301599 ZBBXA8MT70 800 aa21■□□□□ 0.95
TMEM88-201ENST00000301599 F2P00734 622 aa21■□□□□ 0.95
TMEM88-201ENST00000301599 PCNX4Q63HM2 1172 aa21■□□□□ 0.95
TMEM88-201ENST00000301599 TMTC3Q6ZXV5 915 aa21■□□□□ 0.95
TMEM88-201ENST00000301599 RASEFQ8IZ41 740 aa21■□□□□ 0.95
TMEM88-201ENST00000301599 AFAP1L1Q8TED9 768 aa21■□□□□ 0.95
TMEM88-201ENST00000301599 GPKOWQ92917 476 aaPredicted RBP eCLIP21■□□□□ 0.95
TMEM88-201ENST00000301599 FTOQ9C0B1 505 aaKnown RBP eCLIP21■□□□□ 0.95
TMEM88-201ENST00000301599 FIBPO43427 364 aa20.99■□□□□ 0.95
TMEM88-201ENST00000301599 HMGB1P09429 215 aaKnown RBP20.99■□□□□ 0.95
TMEM88-201ENST00000301599 ZNF286BP0CG31 522 aa20.99■□□□□ 0.95
TMEM88-201ENST00000301599 FOSL2P15408 326 aa20.99■□□□□ 0.95
TMEM88-201ENST00000301599 MICU3Q86XE3 530 aa20.99■□□□□ 0.95
TMEM88-201ENST00000301599 CTAGE1Q96RT6 745 aa20.99■□□□□ 0.95
TMEM88-201ENST00000301599 RBM28Q9NW13 759 aaKnown RBP20.99■□□□□ 0.95
TMEM88-201ENST00000301599 hCG_1642624A0A1W2PR95 340 aa20.98■□□□□ 0.95
TMEM88-201ENST00000301599 NOP56O00567 594 aaKnown RBP20.98■□□□□ 0.95
TMEM88-201ENST00000301599 PARNO95453 639 aaKnown RBP20.98■□□□□ 0.95
TMEM88-201ENST00000301599 APOA5Q6Q788 366 aa20.98■□□□□ 0.95
TMEM88-201ENST00000301599 NLRX1Q86UT6 975 aa20.98■□□□□ 0.95
TMEM88-201ENST00000301599 MAFAQ8NHW3 353 aaPredicted RBP20.98■□□□□ 0.95
TMEM88-201ENST00000301599 C16orf70Q9BSU1 422 aa20.98■□□□□ 0.95
TMEM88-201ENST00000301599 SLC28A3Q9HAS3 691 aa20.98■□□□□ 0.95
TMEM88-201ENST00000301599 ZBTB43O43298 467 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 SELPP16109 830 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 ATP2A2P16615 1042 aaKnown RBP20.97■□□□□ 0.95
TMEM88-201ENST00000301599 PTK7Q13308 1070 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 ADCK5Q3MIX3 580 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 METTL7BQ6UX53 244 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 CYFIP1Q7L576 1253 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 GIMAP8Q8ND71 665 aaPredicted RBP20.97■□□□□ 0.95
TMEM88-201ENST00000301599 SENP7Q9BQF6 1050 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 USP26Q9BXU7 913 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 BCAS3Q9H6U6 928 aa20.97■□□□□ 0.95
TMEM88-201ENST00000301599 MYH7BA7E2Y1 1941 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 H3BRB1 525 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 DLL1O00548 723 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 RBL2Q08999 1139 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 HEATR3Q7Z4Q2 680 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 PHOSPHO2Q8TCD6 241 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 TCEANC2Q96MN5 208 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 NKX2-4Q9H2Z4 354 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 TUT1Q9H6E5 874 aaKnown RBP20.96■□□□□ 0.95
TMEM88-201ENST00000301599 BRPF3Q9ULD4 1205 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 PCDHA11Q9Y5I1 949 aa20.96■□□□□ 0.95
TMEM88-201ENST00000301599 SPDYE3A6NKU9 549 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 CKBP12277 381 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 FGD1P98174 961 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 SEMA3FQ13275 785 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 RTN1Q16799 776 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 ERICH6BQ5W0A0 696 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 LRRC8DQ7L1W4 858 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 DHX38Q92620 1227 aaKnown RBP20.95■□□□□ 0.94
TMEM88-201ENST00000301599 KCNB2Q92953 911 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 CDHR1Q96JP9 859 aa20.95■□□□□ 0.94
TMEM88-201ENST00000301599 YBX2Q9Y2T7 364 aaKnown RBP20.95■□□□□ 0.94
TMEM88-201ENST00000301599 V9GY48 417 aaPredicted RBP20.95■□□□□ 0.94
TMEM88-201ENST00000301599 LGALS2P05162 132 aa20.94■□□□□ 0.94
TMEM88-201ENST00000301599 RABGGTBP53611 331 aa20.94■□□□□ 0.94
TMEM88-201ENST00000301599 ZNF200P98182 395 aaPredicted RBP20.94■□□□□ 0.94
TMEM88-201ENST00000301599 TEX2Q8IWB9 1127 aa20.94■□□□□ 0.94
TMEM88-201ENST00000301599 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.94■□□□□ 0.94
TMEM88-201ENST00000301599 GPRASP2Q96D09 838 aa20.94■□□□□ 0.94
TMEM88-201ENST00000301599 GAS2L1Q99501 681 aaPredicted RBP20.94■□□□□ 0.94
TMEM88-201ENST00000301599 GPR20Q99678 358 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms