RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 FBXO41Q8TF61 875 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 WDR24Q96S15 920 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 EMILIN3Q9NT22 766 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 DIXDC1Q155Q3 683 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 TMCO4Q5TGY1 634 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 CHURC1Q8WUH1 139 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 JDP2Q8WYK2 163 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 NT5C1BQ96P26 610 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 NOP53Q9NZM5 478 aaKnown RBP15.41■□□□□ 0.06
COL1A2-201ENST00000297268 GINS2Q9Y248 185 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 MAD1L1Q9Y6D9 718 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 ARHGAP4P98171 946 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 ADCY2Q08462 1091 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 PSMD2Q13200 908 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 PIH1D3Q9NQM4 214 aaKnown RBP15.41■□□□□ 0.06
COL1A2-201ENST00000297268 HDAC6Q9UBN7 1215 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 TEX33O43247 280 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 MMEP08473 750 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 CCZ1BP86790 482 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 CCZ1P86791 482 aaPredicted RBP15.41■□□□□ 0.06
COL1A2-201ENST00000297268 LRRC63Q05C16 580 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 NUGGCQ68CJ6 796 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 HAUS1Q96CS2 278 aa15.41■□□□□ 0.06
COL1A2-201ENST00000297268 PFDN1O60925 122 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 USP14P54578 494 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 PIGSQ96S52 555 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 ARHGAP31Q2M1Z3 1444 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 TESPA1A2RU30 521 aaPredicted RBP15.4■□□□□ 0.06
COL1A2-201ENST00000297268 SH3BP5O60239 455 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 P4HA1P13674 534 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 CYP2C19P33261 490 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 POLE2P56282 527 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 TRIP13Q15645 432 aaPredicted RBP15.4■□□□□ 0.06
COL1A2-201ENST00000297268 HSP90AA5PQ58FG0 334 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 ALKBH5Q6P6C2 394 aaKnown RBP15.4■□□□□ 0.06
COL1A2-201ENST00000297268 TMTC3Q6ZXV5 915 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 CCDC125Q86Z20 511 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 TEKT1Q969V4 418 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 VTI1AQ96AJ9 217 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 CCDC188H7C350 402 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 FGGP02679 453 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 GAP43P17677 238 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 ZNF449Q6P9G9 518 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 CCHCR1Q8TD31 782 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 MLXIPQ9HAP2 919 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 PICK1Q9NRD5 415 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 ATP10DQ9P241 1426 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 SKIP12755 728 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
COL1A2-201ENST00000297268 E4F1Q66K89 784 aaPredicted RBP15.4■□□□□ 0.06
COL1A2-201ENST00000297268 METP08581 1390 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 PLEKHA8P1O95397 391 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 DMP1Q13316 513 aaPredicted RBP15.39■□□□□ 0.05
COL1A2-201ENST00000297268 RPS6KA2Q15349 733 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 MSH2P43246 934 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 BPIFB4P59827 614 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 SLFN13Q68D06 897 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 TMOD4Q9NZQ9 345 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 H7C0C1 242 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 FOSP01100 380 aaPredicted RBP15.39■□□□□ 0.05
COL1A2-201ENST00000297268 ATP5OP48047 213 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 ASPRV1Q53RT3 343 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 SAMD9LQ8IVG5 1584 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 POLR2BP30876 1174 aaKnown RBP15.39■□□□□ 0.05
COL1A2-201ENST00000297268 POMGNT1Q8WZA1 660 aa15.39■□□□□ 0.05
COL1A2-201ENST00000297268 MRPL11Q9Y3B7 192 aaKnown RBP15.39■□□□□ 0.05
COL1A2-201ENST00000297268 CYP2D7A0A087X1C5 515 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 MAP3K7O43318 606 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 PIK3CAP42336 1068 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 TRIM11Q96F44 468 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 SCYL1Q96KG9 808 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 USP6P35125 1406 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 EXOC1LA0A1B0GW35 172 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 GCFC2P16383 781 aaKnown RBP15.38■□□□□ 0.05
COL1A2-201ENST00000297268 TBC1D10CQ8IV04 446 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 CARD10Q9BWT7 1032 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 MEIS1O00470 390 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 RNF8O76064 485 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 ACSL3O95573 720 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 LTKP29376 864 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 SEPT2Q15019 361 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 CERKLQ49MI3 558 aaPredicted RBP15.38■□□□□ 0.05
COL1A2-201ENST00000297268 NFRKBQ6P4R8 1299 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 SRLQ86TD4 932 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 TRIM50Q86XT4 487 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL1A2-201ENST00000297268 ALDH8A1Q9H2A2 487 aaPredicted RBP15.38■□□□□ 0.05
COL1A2-201ENST00000297268 PRCPP42785 496 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 VSNL1P62760 191 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 BEND6Q5SZJ8 279 aaPredicted RBP15.38■□□□□ 0.05
COL1A2-201ENST00000297268 TRIM42Q8IWZ5 723 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 DPF2Q92785 391 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 OSBPL9Q96SU4 736 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 TUBB6Q9BUF5 446 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 UBE2TQ9NPD8 197 aaPredicted RBP15.38■□□□□ 0.05
COL1A2-201ENST00000297268 AFG3L2Q9Y4W6 797 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 GMNCA6NCL1 334 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 LRRC53A6NM62 1247 aa15.38■□□□□ 0.05
COL1A2-201ENST00000297268 HDLBPQ00341 1268 aaKnown RBP15.38■□□□□ 0.05
COL1A2-201ENST00000297268 ICA1Q05084 483 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms