RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 A0A087WUV0 522 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 DAPK3O43293 454 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 ATF2P15336 505 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 PALM2Q8IXS6 379 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 TYW1Q9NV66 732 aaKnown RBP17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 ADD3Q9UEY8 706 aaKnown RBP17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 ADAM21Q9UKJ8 722 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 DAAM1Q9Y4D1 1078 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 STK36Q9NRP7 1315 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 C21orf2O43822 256 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 HIP1RO75146 1068 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 STK10O94804 968 aaKnown RBP17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 SLC8A1P32418 973 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 IREB2P48200 963 aaKnown RBP17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 RAB3IPQ96QF0 476 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 USP17L8P0C7I0 530 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 RFX1P22670 979 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 CCDC197Q8NCU1 140 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 MICAL1Q8TDZ2 1067 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 RSAD2Q8WXG1 361 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 ABHD10Q9NUJ1 306 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 ATP8A1Q9Y2Q0 1164 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 PTPN22Q9Y2R2 807 aa17.48■□□□□ 0.39
ARHGEF28-201ENST00000296794 SNCBQ16143 134 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 CASC4Q6P4E1 433 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 ATF7P17544 494 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 YWHAEP62258 255 aaKnown RBP17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 STAG1Q8WVM7 1258 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 CDC42BPBQ9Y5S2 1711 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 A2ML1A8K2U0 1454 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 DLATP10515 647 aaKnown RBP17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 DYNLL2Q96FJ2 89 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 VCXQ9H320 206 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 VCX3BQ9H321 246 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 CPSF2Q9P2I0 782 aaKnown RBP17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 WDR19Q8NEZ3 1342 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 COA7Q96BR5 231 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 RUNDC3BQ96NL0 473 aa17.47■□□□□ 0.39
ARHGEF28-201ENST00000296794 SERPING1P05155 500 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 GCFC2P16383 781 aaKnown RBP17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 ALS2CLQ60I27 953 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 FAM186BQ8IYM0 893 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 PRR29P0C7W0 189 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 PLTPP55058 493 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 USP17L2Q6R6M4 530 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 RILPQ96NA2 401 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 RNF17Q9BXT8 1623 aaKnown RBP17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 SPHKAPQ2M3C7 1700 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 GDF11O95390 407 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 PSMC2P35998 433 aaKnown RBP17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 LIG4P49917 911 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 DHX9Q08211 1270 aaKnown RBP17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 FAM160B1Q5W0V3 765 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 TMTC3Q6ZXV5 915 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 BMP3P12645 472 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 CDC27P30260 824 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 PHBP35232 272 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 SLC27A3Q5K4L6 730 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 FOXP4Q8IVH2 680 aaPredicted RBP17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 OXER1Q8TDS5 423 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 AXIN2Q9Y2T1 843 aa17.46■□□□□ 0.39
ARHGEF28-201ENST00000296794 KSR1Q8IVT5 923 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 PBKQ96KB5 322 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 NOL3O60936 208 aaKnown RBP17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 MRPS25P82663 173 aaKnown RBP17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 DIXDC1Q155Q3 683 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 KCTD1Q719H9 257 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.45■□□□□ 0.387e-6■■■□□ 14.8
ARHGEF28-201ENST00000296794 EPC1Q9H2F5 836 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 EMILIN3Q9NT22 766 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 PALM3A6NDB9 673 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 TRIM49BA6NDI0 452 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 hCG_1984214I3L0E3 225 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 SRGAP2O75044 1071 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 SLC16A2P36021 539 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 PPP2R5DQ14738 602 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 ZNF713Q8N859 430 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 LY9Q9HBG7 655 aa17.45■□□□□ 0.38
ARHGEF28-201ENST00000296794 LGALS16A8MUM7 142 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 CLIC2O15247 247 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 SUN1O94901 812 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 NR1D1P20393 614 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 GEN1Q17RS7 908 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 STOX1Q6ZVD7 989 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 WHAMMQ8TF30 809 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 TBC1D31Q96DN5 1066 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 ABT1Q9ULW3 272 aaKnown RBP17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 ABCA6Q8N139 1617 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 KIF28PB7ZC32 967 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 GFPT2O94808 682 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 NSFP46459 744 aaKnown RBP17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 TPD52P55327 224 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 PSMD2Q13200 908 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 LRCH2Q5VUJ6 765 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 EMBQ6PCB8 327 aa17.44■□□□□ 0.38
ARHGEF28-201ENST00000296794 BBOF1Q8ND07 529 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms