RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 KIAA1217Q5T5P2 1943 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 TRANK1O15050 2925 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 CHMP4BP1P59074 171 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 MRPS5P82675 430 aaKnown RBP10.91□□□□□ -0.66
CNOT9-202ENST00000295701 TFF2Q03403 129 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 PDE4DQ08499 809 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 ZNF543Q08ER8 600 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 USH1GQ495M9 461 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 SPRED2Q7Z698 418 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 TBC1D10CQ8IV04 446 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 ADAMTS19Q8TE59 1207 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 PCDHA11Q9Y5I1 949 aa10.91□□□□□ -0.66
CNOT9-202ENST00000295701 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.66
CNOT9-202ENST00000295701 CA3P07451 260 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 IQCF3P0C7M6 154 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 SNHG28P0DPA3 235 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 EDNRBP24530 442 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 CPT1AP50416 773 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 GPNMBQ14956 572 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 PPP2R5BQ15173 497 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 PPP1R18Q6NYC8 613 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 RILPL2Q969X0 211 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 TAAR1Q96RJ0 339 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 SEZ6LQ9BYH1 1024 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 COL20A1Q9P218 1284 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 PCDHB3Q9Y5E6 796 aa10.9□□□□□ -0.66
CNOT9-202ENST00000295701 TANC1Q9C0D5 1861 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 NEDD4P46934 1319 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 BRWD1Q9NSI6 2320 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 A6NJR5 290 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 SUPT20HL2P0C7V6 817 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 TXNP10599 105 aaKnown RBP10.89□□□□□ -0.67
CNOT9-202ENST00000295701 RRP1P56182 461 aaKnown RBP10.89□□□□□ -0.67
CNOT9-202ENST00000295701 LY6KQ17RY6 165 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 TCTN1Q2MV58 587 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 TMEM67Q5HYA8 995 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 CCDC62Q6P9F0 684 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 MFSD6Q6ZSS7 791 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 TMCO2Q7Z6W1 182 aaPredicted RBP10.89□□□□□ -0.67
CNOT9-202ENST00000295701 AFG1LQ8WV93 481 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 CTAGE1Q96RT6 745 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 UHRF1Q96T88 793 aaPredicted RBP10.89□□□□□ -0.67
CNOT9-202ENST00000295701 FTOQ9C0B1 505 aaKnown RBP eCLIP10.89□□□□□ -0.67
CNOT9-202ENST00000295701 LNPKQ9C0E8 428 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 MTCH2Q9Y6C9 303 aa10.89□□□□□ -0.67
CNOT9-202ENST00000295701 CCDC171Q6TFL3 1326 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 LOC102724159A0A0B4J2E5 919 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 NKRFO15226 690 aaKnown RBP eCLIP10.88□□□□□ -0.67
CNOT9-202ENST00000295701 GPR37O15354 613 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 BMP1P13497 986 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 KCNQ1P51787 676 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 TAP1Q03518 808 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 PWP2Q15269 919 aaKnown RBP10.88□□□□□ -0.67
CNOT9-202ENST00000295701 GDF6Q6KF10 455 aaPredicted RBP10.88□□□□□ -0.67
CNOT9-202ENST00000295701 NFRKBQ6P4R8 1299 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 SEPT14Q6ZU15 432 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 CHST3Q7LGC8 479 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 RETREG2Q8NC44 543 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 DNERQ8NFT8 737 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 SCFD2Q8WU76 684 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 ARNTL2Q8WYA1 636 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 KAT2BQ92831 832 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 TTC14Q96N46 770 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 VAT1LQ9HCJ6 419 aa10.88□□□□□ -0.67
CNOT9-202ENST00000295701 WDR19Q8NEZ3 1342 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 LCHNA4D1U4 455 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 PFKMP08237 780 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 SDSP20132 328 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 FECHP22830 423 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 ARHGAP1Q07960 439 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 HDAC1Q13547 482 aaPredicted RBP10.87□□□□□ -0.67
CNOT9-202ENST00000295701 SKIV2LQ15477 1246 aaKnown RBP10.87□□□□□ -0.67
CNOT9-202ENST00000295701 PTGISQ16647 500 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 KMT5BQ4FZB7 885 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 BRDTQ58F21 947 aaPredicted RBP10.87□□□□□ -0.67
CNOT9-202ENST00000295701 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 METTL3Q86U44 580 aaKnown RBP10.87□□□□□ -0.67
CNOT9-202ENST00000295701 HERC6Q8IVU3 1022 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 ADGRF4Q8IZF3 695 aa10.87□□□□□ -0.67
CNOT9-202ENST00000295701 SYTL5Q8TDW5 730 aaPredicted RBP10.87□□□□□ -0.67
CNOT9-202ENST00000295701 DHX38Q92620 1227 aaKnown RBP10.87□□□□□ -0.67
CNOT9-202ENST00000295701 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
CNOT9-202ENST00000295701 ZMYM6O95789 1325 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 B4E1Z4 1266 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 SORBS3O60504 671 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 KPNA6O60684 536 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 KDM4AO75164 1064 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 MMP3P08254 477 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 CFHP08603 1231 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 ACTN1P12814 892 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
CNOT9-202ENST00000295701 CDC37Q16543 378 aaPredicted RBP10.86□□□□□ -0.67
CNOT9-202ENST00000295701 QRICH1Q2TAL8 776 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 BLOC1S3Q6QNY0 202 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 PNMA1Q8ND90 353 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 RGS22Q8NE09 1264 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 SLC9A7Q96T83 725 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 HDAC6Q9UBN7 1215 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 NOD1Q9Y239 953 aa10.86□□□□□ -0.67
CNOT9-202ENST00000295701 LAMA4Q16363 1823 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms