RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 EYA3Q99504 573 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 SPZ1Q9BXG8 430 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 SEC63Q9UGP8 760 aaKnown RBP18.85■□□□□ 0.61
SPG7-201ENST00000268704 EDIL3O43854 480 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 HEXIM1O94992 359 aaKnown RBP18.85■□□□□ 0.61
SPG7-201ENST00000268704 EMBQ6PCB8 327 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 EP400NLQ6ZTU2 488 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 CCDC84Q86UT8 332 aaPredicted RBP18.85■□□□□ 0.61
SPG7-201ENST00000268704 DNAAF5Q86Y56 855 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 PACSIN1Q9BY11 444 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 SNED1Q8TER0 1413 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 USP17L5A8MUK1 530 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 ZEB2O60315 1214 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 GNA11P29992 359 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 ICE2Q659A1 982 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 SNX29Q8TEQ0 813 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 NLRP3Q96P20 1036 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 COL14A1Q05707 1796 aaKnown RBP18.84■□□□□ 0.61
SPG7-201ENST00000268704 NAV1Q8NEY1 1877 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 OPA1O60313 960 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 CACNB1Q02641 598 aaPredicted RBP18.84■□□□□ 0.61
SPG7-201ENST00000268704 GUF1Q8N442 669 aaKnown RBP18.84■□□□□ 0.61
SPG7-201ENST00000268704 CEP95Q96GE4 821 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 MTMR9Q96QG7 549 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 ROBO3Q96MS0 1386 aa18.84■□□□□ 0.61
SPG7-201ENST00000268704 A0A087WUV0 522 aaPredicted RBP18.83■□□□□ 0.61
SPG7-201ENST00000268704 PJA2O43164 708 aa18.83■□□□□ 0.61
SPG7-201ENST00000268704 NOL4O94818 638 aa18.83■□□□□ 0.61
SPG7-201ENST00000268704 KLRC1P26715 233 aa18.83■□□□□ 0.61
SPG7-201ENST00000268704 PPP1R2P41236 205 aa18.83■□□□□ 0.61
SPG7-201ENST00000268704 POLR2FP61218 127 aaKnown RBP18.83■□□□□ 0.61
SPG7-201ENST00000268704 NNTQ13423 1086 aa18.83■□□□□ 0.61
SPG7-201ENST00000268704 NBPF5PQ86XG9 351 aaPredicted RBP18.83■□□□□ 0.61
SPG7-201ENST00000268704 KRT12Q99456 494 aa18.83■□□□□ 0.61
SPG7-201ENST00000268704 GOLPH3Q9H4A6 298 aa18.83■□□□□ 0.61
SPG7-201ENST00000268704 WNK3Q9BYP7 1800 aa18.83■□□□□ 0.61
SPG7-201ENST00000268704 COL16A1Q07092 1604 aaPredicted RBP18.83■□□□□ 0.6
SPG7-201ENST00000268704 ZNF233A6NK53 670 aa18.83■□□□□ 0.6
SPG7-201ENST00000268704 CDK8P49336 464 aa18.83■□□□□ 0.6
SPG7-201ENST00000268704 COBLL1Q53SF7 1204 aa18.83■□□□□ 0.6
SPG7-201ENST00000268704 CLEC10AQ8IUN9 316 aa18.83■□□□□ 0.6
SPG7-201ENST00000268704 NELFCDQ8IXH7 590 aa18.83■□□□□ 0.6
SPG7-201ENST00000268704 ANKIB1Q9P2G1 1089 aa18.83■□□□□ 0.6
SPG7-201ENST00000268704 SHTN1A0MZ66 631 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 SSBP05455 408 aaKnown RBP eCLIP18.82■□□□□ 0.6
SPG7-201ENST00000268704 CFAP221Q4G0U5 840 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 FBXW10Q5XX13 1052 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 PROCA1Q8NCQ7 364 aaPredicted RBP18.82■□□□□ 0.6
SPG7-201ENST00000268704 RAD54LQ92698 747 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 CAVIN3Q969G5 261 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 LSM14BQ9BX40 385 aaKnown RBP18.82■□□□□ 0.6
SPG7-201ENST00000268704 TRAF5O00463 557 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 ERLIN2O94905 339 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 EIF6P56537 245 aaKnown RBP18.82■□□□□ 0.6
SPG7-201ENST00000268704 GUCY1A3Q02108 690 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 CCDC40Q4G0X9 1142 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 TBC1D5Q92609 795 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.82■□□□□ 0.6
SPG7-201ENST00000268704 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 EHHADHQ08426 723 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 FAM83BQ5T0W9 1011 aa18.82■□□□□ 0.6
SPG7-201ENST00000268704 SPTY2D1Q68D10 685 aaPredicted RBP18.82■□□□□ 0.6
SPG7-201ENST00000268704 IRS2Q9Y4H2 1338 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 NDUFAB1O14561 156 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 LRRC63Q05C16 580 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 UBE2SQ16763 222 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 RNPC3Q96LT9 517 aaKnown RBP18.81■□□□□ 0.6
SPG7-201ENST00000268704 DDX60LQ5H9U9 1706 aaKnown RBP18.81■□□□□ 0.6
SPG7-201ENST00000268704 PVALEFA0A1B0GWK0 134 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 TNNI2P48788 182 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 RAPGEF1Q13905 1077 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 ALS2CLQ60I27 953 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 GBP6Q6ZN66 633 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 CASKIN2Q8WXE0 1202 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 PIK3R5Q8WYR1 880 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 IQCDQ96DY2 449 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 STK17AQ9UEE5 414 aa18.81■□□□□ 0.6
SPG7-201ENST00000268704 A0A087X0T9 212 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 FAM228BP0C875 321 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 EPB41P11171 864 aaKnown RBP18.8■□□□□ 0.6
SPG7-201ENST00000268704 NFIXQ14938 502 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 SLC9C1Q4G0N8 1177 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 CFAP58Q5T655 872 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 SFMBT2Q5VUG0 894 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 LZTS2Q9BRK4 669 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 ADAMTS1Q9UHI8 967 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 NPHP3-ACAD11A0A0J9YXS1 232 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 CPP00450 1065 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 COASYQ13057 564 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 SLC10A5Q5PT55 438 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 PTF1AQ7RTS3 328 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 KLHL7Q8IXQ5 586 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 IFT20Q8IY31 132 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 LRRC47Q8N1G4 583 aaKnown RBP18.8■□□□□ 0.6
SPG7-201ENST00000268704 FAM133AQ8N9E0 248 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 GDF3Q9NR23 364 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 COL4A3BPQ9Y5P4 624 aa18.8■□□□□ 0.6
SPG7-201ENST00000268704 SSU72P8A0A1W2PR75 194 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 BAG3O95817 575 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 BTDP43251 543 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms