RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 THOC5Q13769 683 aaKnown RBP15.58■□□□□ 0.08
ZC3H4-201ENST00000253048 DDX53Q86TM3 631 aaKnown RBP15.58■□□□□ 0.08
ZC3H4-201ENST00000253048 RNF146Q9NTX7 359 aa15.58■□□□□ 0.08
ZC3H4-201ENST00000253048 SERTAD1Q9UHV2 236 aa15.58■□□□□ 0.08
ZC3H4-201ENST00000253048 SLFN12LQ6IEE8 588 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 NOSTRINQ8IVI9 506 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 SRPK1Q96SB4 655 aaKnown RBP15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 USP26Q9BXU7 913 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 TSKSQ9UJT2 592 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 MAD1L1Q9Y6D9 718 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 ZNF202O95125 648 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 CDR2Q01850 454 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 ACAD9Q9H845 621 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 DONSONQ9NYP3 566 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 SCARA5Q6ZMJ2 495 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 GBP7Q8N8V2 638 aaPredicted RBP15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 K7ERI5 159 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 VPS72Q15906 364 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 CEP85LQ5SZL2 805 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 PCIF1Q9H4Z3 704 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 ATP6V0A4Q9HBG4 840 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 LAD1O00515 517 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 STMN1P16949 149 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 PSMC2P35998 433 aaKnown RBP15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 MTMR1Q13613 665 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 BRIP1Q9BX63 1249 aa15.57■□□□□ 0.08
ZC3H4-201ENST00000253048 NLRP12P59046 1061 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 TRIM11Q96F44 468 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 NAPGQ99747 312 aaPredicted RBP15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 ZNF302Q9NR11 478 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 PLEKHG2Q9H7P9 1386 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 CCL15-CCL14A0A0B4J2E2 113 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 GOLGA8SH3BPF8 625 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 CCL15Q16663 113 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 ACBD5Q5T8D3 534 aaPredicted RBP15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 JADE1Q6IE81 842 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 RAPH1Q70E73 1250 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 CYBBP04839 570 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 CROCCP2Q86T23 111 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 MCUQ8NE86 351 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 SLC39A2Q9NP94 309 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 CALCOCO1Q9P1Z2 691 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 ALDH1A1P00352 501 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 ADCY8P40145 1251 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 PPP1R2P3Q6NXS1 205 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 TAB3Q8N5C8 712 aaPredicted RBP15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 PPFIBP2Q8ND30 876 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 ZNF653Q96CK0 615 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 PRAMEF22A3QJZ6 481 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 C6orf222P0C671 652 aaPredicted RBP15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 LONP1P36776 959 aaKnown RBP15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 SP8Q8IXZ3 490 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 TRPC7Q9HCX4 862 aa15.56■□□□□ 0.08
ZC3H4-201ENST00000253048 PNMA6FA0A0J9YX94 578 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 GTPBP6O43824 516 aaPredicted RBP15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 DCLK2Q8N568 766 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 CD58P19256 250 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 LRRC31Q6UY01 552 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 FGAP02671 866 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 MNAT1P51948 309 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 NAA25Q14CX7 972 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 CCDC157Q569K6 752 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 CCDC62Q6P9F0 684 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 IFT20Q8IY31 132 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 ZNF274Q96GC6 653 aaPredicted RBP15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 GPR108Q9NPR9 543 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 SMYD2Q9NRG4 433 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 BTBD8Q5XKL5 378 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 GDAQ9Y2T3 454 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 MEIS1O00470 390 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 ST8SIA6P61647 398 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 KIAA1755Q5JYT7 1200 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 THNSL1Q8IYQ7 743 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 AAASQ9NRG9 546 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 STRIP2Q9ULQ0 834 aa15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 MAGED2Q9UNF1 606 aaPredicted RBP15.55■□□□□ 0.08
ZC3H4-201ENST00000253048 EIF3CLB5ME19 914 aaKnown RBP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 TMCO4Q5TGY1 634 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 RNF180Q86T96 592 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 DNAAF3Q8N9W5 541 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 RILPQ96NA2 401 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 EIF3CQ99613 913 aaKnown RBP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 ABCB11O95342 1321 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 SCARF1Q14162 830 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 UBE2SQ16763 222 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 DNAJC21Q5F1R6 531 aaKnown RBP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 OTUD7AQ8TE49 926 aaPredicted RBP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 SLC13A4Q9UKG4 626 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 MYOM2P54296 1465 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 STAT3P40763 770 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 GTF2F1P35269 517 aaKnown RBP eCLIP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 SLC10A5Q5PT55 438 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 RPAP3Q9H6T3 665 aaPredicted RBP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 LDHAP00338 332 aaKnown RBP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 ARHGAP4P98171 946 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 SH3RF3Q8TEJ3 882 aaPredicted RBP15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 PGBD4Q96DM1 585 aa15.54■□□□□ 0.08
ZC3H4-201ENST00000253048 DDX50Q9BQ39 737 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms