RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 RARS2Q5T160 578 aaKnown RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 COPRSQ9NQ92 184 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 PPM1FP49593 454 aaPredicted RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 ZMYM1Q5SVZ6 1142 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 TRIM33Q9UPN9 1127 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 NUB1Q9Y5A7 615 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 EIF3HO15372 352 aaKnown RBP eCLIP8.88□□□□□ -0.994e-27■□□□□ 10.4
APOB-201ENST00000233242 CYP4F22Q6NT55 531 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 ADAT2Q7Z6V5 191 aaKnown RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 GDAP1Q8TB36 358 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 NT5C1BQ96P26 610 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 AATFQ9NY61 560 aaKnown RBP eCLIP8.88□□□□□ -0.994e-20■■■■■ 205.9
APOB-201ENST00000233242 PTPN22Q9Y2R2 807 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 HDAC4P56524 1084 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 UHMK1Q8TAS1 419 aaKnown RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 MAML1Q92585 1016 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 DYDC2Q96IM9 177 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.88□□□□□ -0.99
APOB-201ENST00000233242 SRPRBQ9Y5M8 271 aaKnown RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 CORO7P57737 925 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 RESP18Q5W5W9 173 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 APOA5Q6Q788 366 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 TOGARAM2Q6ZUX3 1019 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 SPC25Q9HBM1 224 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 NR2F2P24468 414 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 RANBP1P43487 201 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 DMP1Q13316 513 aaPredicted RBP8.88□□□□□ -0.99
APOB-201ENST00000233242 TPH2Q8IWU9 490 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 AGGF1Q8N302 714 aaeCLIP8.88□□□□□ -0.99
APOB-201ENST00000233242 ANKRD27Q96NW4 1050 aa8.88□□□□□ -0.99
APOB-201ENST00000233242 KRT26Q7Z3Y9 468 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 HDAC11Q96DB2 347 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 MXD3Q9BW11 206 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 MAPK4P31152 587 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 ECE1P42892 770 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 SLCO1A2P46721 670 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 ALCAMQ13740 583 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 TTLL12Q14166 644 aaPredicted RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 PPCSQ9HAB8 311 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 MAP3K19Q56UN5 1328 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 FGAP02671 866 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 PDE6AP16499 860 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 PPP2R5DQ14738 602 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 PPM1KQ8N3J5 372 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 GIPC2Q8TF65 315 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 PROM2Q8N271 834 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 PSTPIP2Q9H939 334 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 ANGPTL3Q9Y5C1 460 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 PSMC2P35998 433 aaKnown RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 MESDQ14696 234 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 TRIM56Q9BRZ2 755 aaKnown RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 ZC3H12CQ9C0D7 883 aaKnown RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 DDX25Q9UHL0 483 aaKnown RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 SYNMO15061 1565 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 ZSCAN20P17040 1043 aaPredicted RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 ICA1LQ8NDH6 482 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 SIRT1Q96EB6 747 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 KRT38O76015 456 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 FGGP02679 453 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 MAGOHP61326 146 aaKnown RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 EAF2Q96CJ1 260 aaPredicted RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 ECT2Q9H8V3 914 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 SCHIP1Q9P0W5 487 aaPredicted RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 TNRQ92752 1358 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 FAM187AA6NFU0 413 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 SGK1O00141 431 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 CIAO1O76071 339 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 ACTN3Q08043 901 aaPredicted RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 NAA35Q5VZE5 725 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 WDR75Q8IWA0 830 aaKnown RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 ZNF653Q96CK0 615 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 PPP1R37O75864 691 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 SERPINB10P48595 397 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 RAD23BP54727 409 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 ETNK1Q9HBU6 452 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 PRDM1O75626 825 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 HAUS5O94927 633 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 AP1B1Q10567 949 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 BEND6Q5SZJ8 279 aaPredicted RBP8.87□□□□□ -0.99
APOB-201ENST00000233242 GCNT4Q9P109 453 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 ARL2BPQ9Y2Y0 163 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 HNRNPCP07910 306 aaKnown RBP eCLIP8.87□□□□□ -0.991e-7■■□□□ 11.5
APOB-201ENST00000233242 ANXA13P27216 316 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 GABPAQ06546 454 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 KLC1Q07866 573 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 ABHD10Q9NUJ1 306 aa8.87□□□□□ -0.99
APOB-201ENST00000233242 EPM2AIP1Q7L775 607 aaPredicted RBP8.86□□□□□ -0.99
APOB-201ENST00000233242 POLR3CQ9BUI4 534 aaPredicted RBP8.86□□□□□ -0.99
APOB-201ENST00000233242 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
APOB-201ENST00000233242 SAMSN1Q9NSI8 373 aaKnown RBP8.86□□□□□ -0.99
APOB-201ENST00000233242 APOBEC2Q9Y235 224 aaKnown RBP8.86□□□□□ -0.99
APOB-201ENST00000233242 GOLGA8FQ08AF8 430 aa8.86□□□□□ -0.99
APOB-201ENST00000233242 GOLGA8DPQ0D2H9 430 aa8.86□□□□□ -0.99
APOB-201ENST00000233242 TMED8Q6PL24 325 aaPredicted RBP8.86□□□□□ -0.99
APOB-201ENST00000233242 WDR19Q8NEZ3 1342 aa8.86□□□□□ -0.99
APOB-201ENST00000233242 ZAP70P43403 619 aa8.86□□□□□ -0.99
APOB-201ENST00000233242 KLHL38Q2WGJ6 581 aa8.86□□□□□ -0.99
APOB-201ENST00000233242 RIOK1Q9BRS2 568 aaKnown RBP8.86□□□□□ -0.99
APOB-201ENST00000233242 PCDHA4Q9UN74 947 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms